Ruminococcus torques: RTO_14470
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Entry
RTO_14470 CDS
T02606
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_14470
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RTO_14470
Archaeal homologous recombinant proteins
RTO_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ABC_ATPase
nSTAND3
AAA_16
AAA_21
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CBL26062
UniProt:
D4M4A0
LinkDB
All DBs
Position
1491166..1493799
Genome browser
AA seq
877 aa
AA seq
DB search
MRPVRLTMSAFGSYAGVQEIDFTKIHSGLFLITGDTGAGKTTIFDAIMYALYDRTSGGRR
DGNMMRSQYASEDTDTYVEYVFSYRGQEYTVRRNPEYLRVGKRRKADGSLRYVKETAKVS
LLLPDGREYQGKKRETDQKIQEIIGLDAGQFTQIAMIAQGDFLKLLHAESKERKKIFSQI
FQTQIYWQIQEALKEKGRDLYIALKESESDIRREMERVEPENTEQQDLADQWKELCELSM
PEGEKVLEAVKNFLEYEESCGKVLKKESEELKKQSETLRMLIQKKEEKNKIFDRLEMEEK
SLLLLNAKQDEMETCRVQAGLGHRAEQARHLEVQALRTAKSVRQIQGEIEQITVWQKEQE
KELSEVKEKAEELEEVFAKEEPEMLKRISQLSDLLPHYANVRKYSKEYENQTGAMQRCIQ
NCQEASAQYEEAYAKFFQEQAGILAKELQEGIPCPVCGSVEHPHPAKISGEAPDKETVEK
LKQRRDLLEQKRIQQQEKFQICKAQLESEQRILGDNPVKEEQVKEELQKMQVELDRKKNE
TKQAQEQCRKMTEESRRQAGKLEGLRGQKAELEKRFVKEQEEFREEISRQEFTSQEEFRE
AKQWIEGWREKDKEVKEHDRQLLEKKAKIETLKEQTAGEKREDPQQEIEKRNEVEHLLKE
KQDHQMQLHSRWTGNQNAYKNLKQYFSSQEAVRKEYEVLSNLSKTANGNLSGSVKLDFET
YVQRTYFRQIIQAANRRLARMTSHEFILQCREIQDLSSQGQAGLDLDVYDLVTDSVRDVK
SLSGGESFMAALSMALGLADIIQNTAGAVSLETMFVDEGFGSLDDASRDRAIQILKELAG
EKGLVGIISHVNELKEQIDWKLNITKTEHGSQAKWEI
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggtgagattgacgatgtccgcattcggatcttatgcgggcgtccaggagata
gattttacaaagattcacagcggattatttctgattaccggagatacgggtgcaggaaaa
acaaccatctttgatgcaatcatgtatgcgctgtatgaccggacgagtggcggacgcaga
gatggaaatatgatgcgcagccagtatgcatcagaggatacagacacttatgttgaatat
gtgttttcttatcggggacaggaatataccgtgcgccgtaatccggaatatctccgggta
gggaagagaagaaaagcagatggaagcctccggtatgtgaaagagacagcgaaggtgagt
ctccttcttccggacggaagggaatatcaggggaagaagcgagagacagaccagaagatt
caggaaatcattggtcttgatgctgggcagtttacacagattgccatgatcgcgcaggga
gatttcttaaagcttcttcatgcagaatcaaaagaacgaaaaaagatcttctcgcagatt
ttccagacacaaatctactggcaaatccaggaagcactgaaagaaaaaggaagagatctg
tatattgcgctgaaggaaagtgaatcagacattcgacgtgagatggagcgtgtggaaccg
gagaatacagagcagcaggatctggcagaccagtggaaagaactctgtgagttatccatg
ccggaaggggaaaaggttctggaggctgtgaaaaactttctcgaatatgaagaaagttgt
ggaaaagtcttaaagaaagaatcagaggaacttaagaaacagtcagaaacacttcgaatg
ctgattcagaagaaagaagagaagaataagatatttgaccgtttggaaatggaagagaag
agtttgcttcttctgaatgcaaaacaggacgagatggaaacttgtcgggttcaggcaggg
cttggacaccgggcagagcaggcgagacatttggaagtgcaggctcttcgaacagcgaaa
tccgtgaggcagatacagggcgagatcgagcagattactgtatggcagaaggaacaggaa
aaggaactttctgaggttaaagaaaaagcggaagaattggaagaagtttttgcaaaggaa
gaaccggaaatgctgaaaagaatttcacagttatcggatcttcttccacattacgcaaat
gtgcgtaagtattcgaaagaatatgaaaatcagacaggggcaatgcagcgatgtatacag
aattgtcaggaagcatcagctcagtatgaggaagcatatgcgaaattctttcaggagcag
gcgggaatcctggcaaaggaattacaggaaggtattccatgtccggtttgcggatcagta
gaacatccgcatccggcaaagatttccggagaagcaccggataaagagacggtagagaaa
ctgaagcaaagacgtgatctgctggaacaaaaacgaatacagcagcaggaaaagtttcag
atatgtaaagcacagcttgaatcagaacaacgtattctcggagataatcctgtgaaagaa
gagcaggtgaaagaagagcttcagaagatgcaggttgaactggatcggaagaagaatgaa
acaaagcaggcacaggaacagtgccgtaagatgacggaggaaagcagacgtcaggcagga
aaactggagggacttcgaggccagaaggcagaacttgagaagcgttttgtaaaagagcag
gaagagttccgagaggagatcagccgacaggaatttacttcacaggaagaattccgtgag
gcgaaacagtggatcgaagggtggcgggagaaagacaaagaagtgaaagaacatgaccgc
cagctgttagagaaaaaggcaaagatcgagacgctgaaggaacagactgcaggcgaaaag
cgggaagatccgcagcaggagatagaaaagcgaaatgaagtagaacatctgttgaaagaa
aaacaggatcatcagatgcagcttcacagcagatggacaggtaaccagaatgcatacaag
aatctgaaacaatatttttcttcgcaggaagctgtgcgaaaagaatatgaggtactttcc
aatctgagcaagactgcaaatggcaatttgagtggcagtgtgaaacttgattttgagacg
tatgtacagcggacttatttccggcagatcattcaggcggcaaaccgcaggctggcgcgg
atgacatcacatgaatttattttacagtgcagggagattcaggatctgagcagtcaggga
caggccggccttgatctggatgtctatgatctggtgacagattctgtcagagatgtaaag
tctctctcaggaggagaatccttcatggcagctttgtcgatggcattgggacttgcagat
attatccagaatacagccggagcagtgagtctggagacgatgtttgtagatgaaggattc
ggatctctggatgatgcatcaagagaccgtgcgattcagattctcaaagaacttgcagga
gagaaaggactggttggaatcatttcccatgtaaatgaattgaaagagcagattgactgg
aaattaaatattacaaagacggagcatggaagtcaggcaaaatgggaaatctaa
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