Ruminococcus torques: RTO_15660
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Entry
RTO_15660 CDS
T02606
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_15660
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_15660
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RTO_15660
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Topoisomerases
RTO_15660
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTO_15660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Zn_ribbon_GRF
Zn_ribbon_GRF_2
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
CBL26163
UniProt:
D4M4K1
LinkDB
All DBs
Position
1621504..1623579
Genome browser
AA seq
691 aa
AA seq
DB search
MAHYLVIVESPAKVKTIKKFLGSNYTVAASQGHVRDLPKSQLGIDVENDYEPKYITIRGK
GEILATLRKEAKKSDKVYLATDPDREGEAISWHLAAALKLDEKKMRRITFNEITKNAVKA
SLKAPRDIDMDLVDAQQARRELDRMVGYKISPLLWAKVKRGLSAGRVQSVALRIVADREA
EIDAFIPEEYWSLDAQLKVKGEKRPLTAKFYGTEKKKMTIHSKEEMDEILKKLENEEFQI
TDIKNSERTRKAPLPFTTSTLQQEAAKALNFGTQKTMRIAQQLYEGVDIKGNGTVGVITY
LRTDSTRISEEADAAARSYIAETYGEAYVAEGTKTKSADKKIQDAHEAIRPTDITRTPAA
IKDSLSRDQFRLYQLIWKRFTASRMQPAKYETTAVKIGAGEYCFTVSTARVAFDGFRSVY
VEAEEEKEESNVLVGHLSMDSVLTKEEFDPKQHFTQPPAHYTEASLVKTMEELGIGRPST
YAPTISLILGRRYITKEGKNLYLTEIGEVVNNIMKQSFPSIVDVHFTANMEGLLDMVEEG
KVPWKEVIRNFYPDLEEAVEIAEKELEEVKIEDEVTDVICEECGRNMVIKYGPHGKFLAC
PGFPECRNTKPYLEKIGVPCPVCGKEVVIRKTKKGRKYYGCEDNPECEFMSWQKPSSKKC
PECGGYMVEKGNKLVCADEKCGYVETIKKED
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcacattatcttgtaatcgtggagtctcctgcaaaggtgaagacgattaaaaagttt
ctaggaagcaattatacagttgcagcatcacagggacacgtcagggatctgccgaaaagt
cagctaggaattgacgtggagaatgattacgaaccaaaatatattaccattcgtggaaaa
ggagagattcttgcaacgctcagaaaagaggcgaagaaatcagacaaagtttatcttgca
accgaccctgaccgtgaaggagaggctatttcctggcatcttgctgctgccttgaagctg
gacgagaagaaaatgcgccgtattacatttaatgagattacaaagaatgctgtgaaagca
tctttgaaagcaccacgtgatattgacatggatcttgtggatgcacagcaggcaagaaga
gagcttgaccgtatggttggatataagatcagtccattgctttgggcaaaggtaaagcgt
gggttgagtgccggacgtgtacagtcagtcgcacttcgtattgttgcagacagggaagca
gagattgatgcatttattccggaagagtactggtcattggatgcacaactgaaagtaaaa
ggtgagaaacgtcctctgacagcgaagttctacggaacagagaagaaaaagatgacgatc
cattcaaaagaagagatggacgagatcttaaagaaattagagaacgaagagttccagatt
acagatatcaagaacagtgagaggacgcgtaaagcaccactcccatttacgacaagtacg
ctgcagcaggaagctgccaaggcattgaactttggtacacagaagacaatgcgtattgca
cagcagctgtatgaaggtgtggacattaaagggaatggaacagtcggtgtgattacttat
cttcgtacggattctacacgtatttcagaggaagctgatgcagcagcaagaagttatatt
gctgagacttacggggaagcatatgtagcagaaggaacaaaaacaaagtccgcagataag
aagattcaggatgcgcatgaggcgatccgcccgacagatattacacgcacaccggcagca
atcaaggattcattaagcagagatcagttccgtctgtatcagctgatctggaaacgcttc
acagcaagccgcatgcagccggcgaagtatgagacaacagcagtcaagatcggagccggt
gagtactgctttactgtatcaacagcaagggttgcatttgatggatttcgctctgtgtat
gtagaggcagaggaagagaaggaagagagcaatgtactggttggacatcttagcatggat
tctgttcttacaaaagaagaatttgatccaaagcaacattttacgcagccgccggcacat
tatacagaggcgagtcttgtaaagacaatggaagagcttgggatcggacgtccaagtacc
tatgccccaaccatttctctgatccttggaagaagatatattacaaaagaaggcaagaat
ctttatctgacagagattggtgaagttgttaataatattatgaaacagtcattcccaagt
attgtagatgttcattttacagcgaatatggaagggcttcttgatatggttgaagaagga
aaggttccgtggaaggaagtaatccgtaatttctatccggatcttgaggaagctgttgaa
attgcagagaaagagcttgaggaagttaagattgaagatgaagtaacagatgtgatctgt
gaagagtgcggtcgtaacatggtgatcaaatacggtccgcatggtaaattccttgcatgc
ccgggattcccggaatgcagaaatacaaaaccatatctggaaaagatcggagttccgtgt
cctgtgtgtggaaaagaagttgttatccgcaaaacaaaaaagggaagaaagtattatgga
tgtgaggataatccggaatgtgaatttatgtcctggcagaagccatccagtaagaaatgt
ccggaatgtggtggatacatggtagaaaaaggcaataaattagtttgtgctgatgaaaag
tgcggatatgtggaaacaattaagaaagaagattaa
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