Ruminococcus torques: RTO_16150
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Entry
RTO_16150 CDS
T02606
Name
(GenBank) transporter, NhaC family (TC 2.A.35)
KO
K18218
tetracycline resistance efflux pump
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rto02000
]
RTO_16150
01504 Antimicrobial resistance genes [BR:
rto01504
]
RTO_16150
Transporters [BR:
rto02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RTO_16150
Antimicrobial resistance genes [BR:
rto01504
]
Gene variants
Tetracycline resistance genes
Transporters
RTO_16150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
CBL26205
UniProt:
D4M4P3
LinkDB
All DBs
Position
1678995..1680629
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AA seq
544 aa
AA seq
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MRNKRKMGYVFLMSLLILCCSSTTVFAADTSAEYVPQLYATIWSLVPPVVAIVLALITKE
VYSSLFVGILIGGVFWSGFKPEATILHVFQDGVVGVLTDSYNMGILVFLVILGVMVCMMN
KAGGSAAFGRWAKEHIKTRAGAQLATIVLGVLIFIDDYFNCLTVGSVMRPVTDSHNVSRA
KLAYLIDATAAPICIIAPISSWAAAVTGFVKGEDGFSIFIRAIPYNYYAILTIIMMVTLV
LAKEDYGPMKAHEKNAIEGDLFTTGDRPFENTSENAIYNKGKVIDLVFPILSLIVCCVIG
MIYSGGFFSGTGFVEAFSGSDASVGLMLGSFFAMVITIVFYAVRKVLRFSDSMACIPEGF
KAMVPAILILTFAWTLKAMTDSLGAAPFVASVMNSAAGGLMNLLPAIIFLVGCFLAFATG
TSWGTFGILIPIVVAVFQGTNETMMIISISACMAGAVCGDHCSPISDTTIMASAGAQCNH
VNHVSTQLPYAMTVAAVSCITYVIAGILQNAVICLVIGIALQIGVLLAIKAITKDHTGRV
KTTN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaaaagaaaaatggggtatgtgtttctgatgtctctgctcattctgtgctgt
agttcaacaacagtatttgccgcagatacatctgccgagtatgtacctcagctctatgca
acaatctggtctttggtgccgccggtcgttgcaatcgtactggcacttattacaaaggaa
gtttatagctccttattcgttggaattttgatcggaggtgtattttggtcaggatttaaa
ccggaagctacaattttacatgtatttcaggatggagtagtgggagtacttacagattct
tacaatatgggtattctagtatttctggtaattcttggtgttatggtatgtatgatgaat
aaagccggtggttccgcagcattcggacgctgggcgaaagagcatatcaagacaagagcg
ggtgcacagcttgcaacaatcgtacttggagtgctgatttttattgatgattattttaac
tgccttacagttgggagcgttatgcgtcctgtaacagacagccacaatgtatcccgtgcg
aaacttgcatatctgatcgatgctacagcagcgccaatctgcattattgcaccgatttct
tcctgggcagcagcagtaacaggatttgttaaaggggaggatggattttcaatttttatt
cgtgcaatcccatataactattatgcaattcttacaattataatgatggtaacactggtt
cttgcaaaagaagattatggcccgatgaaggcgcatgagaaaaatgcgattgaaggggat
ctttttacaacaggagacagaccatttgaaaatacatccgaaaatgcgatttacaataaa
ggaaaagtaatcgatcttgtattcccgattctgtcacttattgtatgctgtgtcattggt
atgatttattctggtgggttcttctcaggaacaggctttgtagaggctttctccggaagt
gatgcatcggttggactgatgcttggaagtttctttgcaatggtaattacaattgttttt
tatgcagtaagaaaagttcttcgtttttcggattctatggcttgcattccggaaggattt
aaggcaatggttccggctatcctgattcttacattcgcatggactctgaaagcaatgaca
gacagtctcggagcagctccattcgtagcttctgtaatgaattcagcagcaggcggattg
atgaaccttctcccagcaatcatcttccttgtaggatgtttccttgcatttgcaacaggt
acttcctggggaacattcggaattctgattccaatcgtagttgcagtattccagggtacg
aacgagacaatgatgatcatctcgatctcagcttgtatggccggagcggtttgcggagat
cattgttcacctatttcagatacaacaatcatggcatccgcaggagcgcagtgtaatcat
gtaaatcatgtatccacgcagcttccatatgcaatgactgtagcagcagtttcctgtatt
acatatgtgatcgcaggtatcttacagaatgcagtcatctgtctcgtgatcggaattgct
ctgcagattggagttctgcttgcaatcaaagcaatcacaaaagatcacacaggtagagtg
aaaacaacaaactaa
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