Ruminococcus torques: RTO_16430 Help Entry RTO_16430         CDS       T02606                                  Name (GenBank) excinuclease ABC, A subunit   KO K03701   excinuclease ABC subunit A Organism rto  Ruminococcus torques Pathway rto03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:rto00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     RTO_16430  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rto03400]     RTO_16430 DNA repair and recombination proteins [BR:rto03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      RTO_16430   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       RTO_16430 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_33 nSTAND3 BCA_ABC_TP_C AAA_25 NACHT cobW SLFN-g3_helicase DnaJ_CXXCXGXG Motif Other DBs NCBI-ProteinID:  CBL26227 UniProt:  D4M4R5 LinkDB All DBs Position 1707994..1710837 Genome browser AA seq 947 aa AA seqDB search MGKKMDARQYIKIRGANENNLKNIDVDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRY MESLSSYARQFLGQMEKPDVESIEGLSPAISIDQKSTNHNPRSTVGTVTEIYDYFRLLYA RVGIPHCPKCGREIAKQSVDQMVDQIMALPERTKIQLLAPVVRGRKGTHAKLFERAKKSG YVRVRVDGNMYELSEEIALDKNVKHNIEIIVDRLVIKPGIEKRLTDSVENVLQLAEGLLL VDVIDGEPMNFSQSFSCPVCEISIDEIEPRSFSFNNPFGACPECFGLGYKMEFSEELMIP DPSLSINQGAIAVLGWQSCTDKSSFTRAILDALCKEYHFDLDTPFEDYPKEIHDVLIYGT DGKEVKVYYKGQRGEGIYPVAFEGLIKNVERRYRETGSQTMKAEYETFMNITPCSACKGQ RLKPGALAVTVGDKNISEVTTLSIERLQKFLDELQLTETQQLIGNQILKEIKARISFLMD VGLDYLTLARATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLATLK HLRDLGNSLIVVEHDEDTMLAADYIVDIGPGAGEHGGQVVAVGNSQEIMKNPNSVTGAYL SGKIRIPVPTERKKPTGYLKVVGAQENNLKNIDVKFSLGVMTCVTGVSGSGKSSLVNQIL YKRLARDLNRARTIPGKHKRIEGLEQVDKVINIDQSPIGRTPRSNPATYTGVFDLIRDLF AGTPDAKARGYKKGRFSFNVKGGRCEACAGDGILKIEMHFLPDVYVPCEVCGGKRYNRET LEVRYKGKNIYDVLNMTVEEAVDFFENVPSIRRKMETLRDVGLSYIRLGQPSTELSGGEA QRIKLATELSKRSTGKTVYILDEPTTGLHFADVHKLTEILRRLSGDGNTVIVIEHNLDVI KTADYIIDIGPEGGDRGGTVVASGTPEEVAKNPDSYTGKYIASILEK NT seq 2844 nt NT seq  +upstreamnt  +downstreamnt atgggtaagaaaatggacgccagacagtacattaagatacgaggcgcgaatgagaataac ctgaagaatatagatgtagatatcccaagaaatgaactggttgttttgacgggacttagc ggttctggaaaatcttctcttgcatttgatacaatttatgcagagggtcagagacgttat atggaatcactgtcttcctatgcaagacagtttcttggtcagatggagaaaccggatgta gaaagtatcgaagggctttcacctgcaatttctatcgatcagaaatcaacgaaccacaat ccacgttccacagttggaactgttacggagatttatgattattttcgattattatatgcg agagttggaattccgcattgcccgaaatgtggtcgtgagattgcaaaacagtcggtagat cagatggtggatcagatcatggcgcttccggagagaacgaagatacagcttttggcacct gttgtacgtggaagaaaaggaacacatgcaaagcttttcgaacgtgcaaaaaagagtgga tatgttcgtgttcgtgtggatggcaatatgtatgagctttcggaagagattgcactggat aagaatgttaaacataatattgaaattattgtggatcgtcttgtgataaaacctggaatt gaaaagcgactgacagattccgtggaaaatgtacttcagctggcagagggactgcttctt gtagatgtgatcgatggagagccaatgaatttcagtcagagtttttcctgtcctgtctgt gagatcagtattgatgagattgaaccacgcagtttttcttttaacaatccatttggtgct tgcccggaatgttttggacttggatacaaaatggaattttcagaagaactgatgattccg gatccgtcgttgtctattaatcaaggtgcgattgcagttttaggatggcagtcctgtaca gacaagagcagcttcacacgtgcaattttggatgcactgtgtaaagaatatcattttgat ctggacaccccttttgaggactatccgaaagaaatccatgatgttttgatttatggaaca gatggaaaagaagtgaaggtttattataaaggtcagagaggcgaagggatttatccggtt gcatttgaaggattgatcaagaatgtggaacgtcgttaccgtgagacaggttctcagacg atgaaagcagaatatgagacatttatgaatattacaccatgttcagcctgtaaaggacag cgcttgaagccgggggctttagctgtaacagttggagataagaatatttcagaagtgaca acactttctatagaacgtcttcagaaatttttagatgaacttcaattgacagagacacag cagttgattggtaatcagattctgaaagagatcaaagcaagaatcagttttttgatggat gtcggtctggattatctgacgcttgcgcgtgcgacgggaacactttccggtggagaagca cagagaattcgacttgcaacacagattggatcaggtctggtcggagttgcatatattctg gatgagccgagtatcggacttcatcaaagagataatgataaacttcttgcgacgctgaaa catttgcgtgatcttggaaattcattgattgtagtagaacatgatgaagatacgatgctg gcagcggattatatagtagatatcggtccgggggcaggagaacatggcggtcaggttgtt gctgtgggaaattcacaggaaattatgaaaaatccaaattctgtcacaggagcgtatttg agtggaaaaatcaggattccggttccgacagaaagaaagaagccgacaggttatctgaag gtagtcggtgcacaagagaataatctcaagaacattgatgtaaaattctctttgggagtt atgacttgtgtaacgggagtgtctggatcggggaaaagttctcttgtgaatcagatttta tataaaagacttgcaagagacttgaaccgggcaagaacaatccccggaaaacataagaga atagaagggctagagcaggttgacaaagtgattaatatcgaccagtcaccaatcggaagg acgccacggtcaaatcctgccacttatacaggcgtgtttgatttgatccgagatttgttt gcaggaacgccggatgcaaaagcacgtggatacaagaaaggacggtttagctttaatgtt aaagggggacgttgcgaagcatgtgcaggagacggaatcctgaaaatcgagatgcatttt cttccggatgtttatgttccatgtgaggtctgtggtggaaagcgttacaatcgtgagact ctggaagtacgctataaagggaaaaatatttatgatgtattgaatatgacagtggaagaa gcggtagatttcttcgaaaacgtgccaagtattcgaagaaagatggagacgttgagagat gtcggattgtcgtatattcgtttgggacagccttctacagagctttcaggtggcgaggca cagagaattaaacttgcgacagaacttagcaaacgcagtaccggaaaaacggtatatatt ctggatgaacctacgacaggacttcattttgcggacgtgcataaattaacagagattctc cgcagactttccggtgatggaaatacagtaattgtaatcgaacataatctggatgtgatt aagacggcagactatattattgacattggaccagaaggaggagaccgcggaggaactgtt gtggcaagtggcactccggaagaggtcgcaaagaatccagattcttatacagggaaatat attgcgtctatattggagaaataa

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