Ruminococcus torques: RTO_17730
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Entry
RTO_17730 CDS
T02606
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RTO_17730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rto03019
]
RTO_17730
03009 Ribosome biogenesis [BR:
rto03009
]
RTO_17730
03036 Chromosome and associated proteins [BR:
rto03036
]
RTO_17730
Enzymes [BR:
rto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RTO_17730
Messenger RNA biogenesis [BR:
rto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RTO_17730
Ribosome biogenesis [BR:
rto03009
]
Eukaryotic type
90S particles
RNase
RTO_17730
Prokaryotic type
rRNA processing factors
RTO_17730
Chromosome and associated proteins [BR:
rto03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RTO_17730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
CBL26339
UniProt:
D4M527
LinkDB
All DBs
Position
1852828..1853514
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AA seq
228 aa
AA seq
DB search
MDRVKELEQKIGYVFKDKSLIERALMHSSYTNEKHLKKYECNERLEFLGDAVLELVSSAY
LFNEFPKVSEGELTKTRASMVCEPSLAMCARDIGLGDYLLLGKGEEATGGRKRDSITSDA
MEALIGAIYLDGGFTNAKEFIHHFILTDLEDKKLFYDSKTILQEIVQANMTGNVSYELID
EQGPDHNKIFEVEARIGRKAWGRGKGSSKKSAEQQAAYEAILNLRKKK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggacagagtaaaagaactggaacaaaagatcggatatgtgtttaaagacaaaagcctg
atcgaacgtgcattgatgcatagttcttatacaaatgagaaacatttgaagaaatatgag
tgtaatgaacgcctggagtttcttggagatgcagtattggaattggtatcaagtgcttat
ttatttaatgaatttccaaaggtatctgagggagaactgacaaagacacgtgcaagtatg
gtatgtgaaccgtctctggcaatgtgtgcaagagatatcggacttggagattacttgctt
cttggaaaaggagaagaggcgaccggtggaagaaaaagagattctatcacatctgatgcg
atggaagcattgatcggtgctatctatctcgacggtggttttactaatgcaaaagagttt
atccatcattttattttgacagatttagaggataaaaaactcttttatgatagtaaaacg
atcttacaggagatcgtgcaggcgaatatgacggggaatgtaagttatgaactgattgat
gaacagggaccggatcataataagattttcgaagtggaagcaagaatcgggagaaaagcc
tggggacgtggaaaaggaagctcgaagaagtcagcagaacagcaggcagcttatgaggca
attctgaatctcagaaagaaaaagtaa
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