Ruminococcus torques: RTO_18670
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Entry
RTO_18670 CDS
T02606
Name
(GenBank) Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rto03000
]
RTO_18670
Transcription factors [BR:
rto03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RTO_18670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Fe_dep_repress
HTH_11
TrmB
HTH_41
Motif
Other DBs
NCBI-ProteinID:
CBL26423
UniProt:
D4M5B1
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All DBs
Position
1942697..1944100
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AA seq
467 aa
AA seq
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MYELTMSLNPKSKTPLYEQIYEFIKEEIQNNVIQSGERLPSTRALSKHLVVSRSTVELAY
EQLLSEGYVEAIPCKGYFVAKIEGIYQLQKRPEIKVEPISSGVTEYAYDFTPNGVDLNSF
PYNVWRKLSKECLIDDKAEMFRLGNPQGEYGLRNVISSYLHQARGIHCHPDQIIIGAGSD
YLLMLLTTVIGNCHKVALENPTYGQAYRLFERLSYKVCTVDMDQSGMRIDELEKSGADIA
FVMPSHQYPLGCVMPIQRRMELLKWADGAEGRYIIEDDYDSEFRYKGKPIPALQGSDSNG
KVIYTGTFSKSLAPSIRMSYMVLPEHILKIYQEKCRFISSTVSKVDQMILQKFMEEGYYE
RHLNKTRALYKNRHDVLISSLRKMKEILEISGENAGVHLLLHFKTDDSEKDLIEKAAKQG
VRVYGLSEYCVKDNEDSTGKAVILLGYANMNEERIRAAVQLLCKAWK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaattgacaatgagtttgaatccaaaatcaaaaactccgctgtatgaacagatt
tatgaatttatcaaggaagagattcagaataacgtaatacagagtggagagcggcttcca
tctacaagagcattgagtaagcatctggtagtgagcaggagtacagtagaacttgcatat
gaacagctcctgtcggaagggtatgtggaggcaatcccatgcaaaggatattttgtcgca
aagatcgaaggtatatatcagcttcagaagagaccggagatcaaagttgaaccgatttct
tcaggagtgacagaatacgcgtatgatttcactccgaacggtgtggatcttaacagtttt
ccgtataatgtctggagaaaattatccaaagaatgcctgatagatgataaggcagagatg
ttccgattggggaatcctcaaggggaatatgggcttcggaatgtaatcagcagttatttg
catcaggcaagaggaatacactgtcatccggatcagatcattattggagcaggaagtgat
tatttgcttatgcttttaacgacagtgattggaaattgtcataaagttgcgctggaaaac
ccaacctatggacaggcctatcgtttgtttgaacgattaagctataaagtctgtactgtt
gatatggatcaaagcgggatgcggattgatgaattagagaaatcaggggcggatattgca
tttgtcatgccgtctcatcagtatccacttggatgtgttatgccgatacaaagaagaatg
gaacttttgaaatgggcagatggggcagaaggcagatatattattgaagatgattacgac
agtgaatttcgatataaaggaaagccgattccggcactgcagggaagtgatagcaatggg
aaagtgatttatacaggtaccttttctaaatcactggcaccttctattcgaatgagctat
atggtgcttccggaacatattttgaaaatttatcaggaaaaatgcagattcatcagttct
actgtctccaaggtggatcagatgattcttcagaaatttatggaagaaggctattatgag
cgacatctgaataaaacacgcgcattatataagaacaggcatgatgttctgatcagcagc
cttcggaagatgaaagagattctagaaatttccggagaaaatgcaggggttcacctgttg
ctgcattttaagacggatgattccgaaaaggatttgattgaaaaagcagcgaaacaagga
gtcagagtttatggcttatcagagtattgtgtaaaagataatgaagatagtacaggaaaa
gcggtgattctgttaggttacgcaaacatgaatgaggagagaatccgtgcagcagttcaa
ctactctgtaaggcatggaaatag
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