Ruminococcus torques: RTO_19460
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Entry
RTO_19460 CDS
T02606
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_19460
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_19460
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RTO_19460
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Topoisomerases
RTO_19460
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTO_19460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBL26492
UniProt:
D4M5I0
LinkDB
All DBs
Position
2019392..2021632
Genome browser
AA seq
746 aa
AA seq
DB search
MSNESQIIRTEYSDLMKKSYIDYAMSVIIARALPDVRDGLKPVQRRTLYDMYELGIRYDK
PYRKSARIVGDTMGKYHPHGDSSIYDSLVVMAQDFKKGQVLVDGHGNFGSIEGDGAAAMR
YTEARLTKFTQEVCLADLDKNVIDFGPNFDETEKEPLVLPMRVPNLLINGAEGIAVGMAT
SIPTHNLCEVVDAVKAYMKNDKITTKQLMKYIKGPDFPTGGIVVNKDDLPAIYESGQGKI
KLRGKVEVEELKGGKKQLVITEIPYTMIGAGIGKFLNDVCNLVESKKTTDIVDISNQSSK
EGIRIVIELKRGADVENLKNMLYKKTRLEDTFGVNMLAVANGRPETLSLKQIIEHHVDFQ
FELATRKYTTLLGKEREKSEVQEGLIKACDVIDLIIEILRGSKSVKDARACLVNGETENI
KFKSAISKKMAAMLRFTERQATAILEMRLYRLIGLEIEALQKEHEKTLENIARYEDILNN
YDSMAGVIMEELDSYKKEFGRKRRTVVENAEEAVFEEKKIEEQQVVFLMDRFGYAKTVDT
GVYERNKEAADKENKYIVHCMNIGKLCLFTDEGKMHQVKVLDLPHGKFRDKGIPIDNVSN
YSSSEEQIVMICEEEQMRYSKLLFATAQGMIKRVDGSEFQVSKRTIAATKLQEEDRLVAV
KVVTEYQNVVLQTKNGYFLRFLSADVPEKKKAAVGVRGIKLQKKDELEEVYLFEEGTETK
ITYGEKTVSLNRLKLAKRDGTGTKSR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaatcacagatcataaggacagaatattctgatcttatgaagaaatcttat
attgattatgcgatgagtgttattatcgccagagcacttccggatgtccgtgatggtctc
aagccggttcagcgtcgtacactttatgatatgtacgagcttggtatccgttatgataag
ccttatcgtaagagtgcacgtatcgtcggagatacgatgggtaaatatcatccgcatgga
gacagttccatctacgattctcttgtagtaatggcgcaggacttcaagaagggacaggtt
cttgttgacgggcatggtaactttggatccattgagggagacggagctgctgcgatgcgt
tatacagaggcgcgccttacgaagttcacgcaggaagtatgtctggccgatctggataag
aatgttattgattttggtccaaactttgatgagacggagaaggaaccgcttgtgcttccg
atgcgtgtgccgaaccttctgatcaatggtgcggaaggaattgcagtcggtatggcgaca
agtatcccgacacataatctctgcgaagtggtcgatgcggtcaaggcatatatgaagaat
gacaagatcactacaaagcagctgatgaaatatatcaaaggaccggatttcccgaccgga
ggaattgtggtcaataaggatgatcttccggcaatctatgagagcggacaggggaagatc
aagctgcgtggaaaagtggaagtggaagaattaaaaggcggcaagaagcagcttgtgatc
acagagatcccatacacgatgatcggagccggaatcggaaagttcttaaacgatgtctgc
aatcttgtggaatccaagaagacgacagatatcgttgatatttcaaaccagtcttcaaaa
gaaggaatccgtatcgtgatcgaattgaagcgtggtgcggatgttgagaacctgaagaac
atgctttataagaagacacgtctggaagatacatttggtgtaaatatgctggcggttgcg
aatggcagaccggagactttaagtctgaaacagatcatagaacatcatgtggatttccag
tttgagcttgcaacgaggaaatatacaactttgcttggcaaagagcgggagaagagtgaa
gttcaggaaggtctgatcaaagcatgtgatgtgatcgacctgatcattgagattttacga
ggaagtaaatctgtaaaagatgcgcgtgcctgtctggtaaacggtgagacggaaaacatt
aagttcaagtctgcgatttccaaaaagatggcggcaatgctccgttttacagaacgtcag
gcaacggcaattctggagatgcgtctttatcgtctgattggtctggagattgaagcactt
cagaaagaacatgagaagacattagaaaatattgcccgttatgaagatattttaaataac
tatgattctatggcaggcgtgatcatggaagagcttgacagttataaaaaagaattcgga
agaaagcgtcgtaccgttgtggagaatgcagaagaagctgtttttgaagagaagaagatt
gaagagcagcaggtcgtctttctgatggatcgctttggttacgcgaagacagtggatacc
ggagtctatgagaggaataaagaagctgcagacaaagagaataaatacattgtgcattgt
atgaacattggaaaactctgtctatttacagatgaaggcaagatgcatcaggtgaaggtg
cttgatcttccacatggaaagttcagagacaaagggattccgattgataatgtaagtaat
tattcaagcagtgaagaacagattgttatgatctgtgaagaagagcagatgcgttattca
aaattattgtttgcaacagcacagggaatgatcaagcgtgtggatggaagtgaatttcag
gtatccaagcgcacgatcgcggcaacaaagctgcaggaagaagacaggcttgtcgcagtg
aaggttgtgacggagtatcagaatgttgtccttcagacgaagaacggatatttcctgagg
tttttatctgcggatgttccggaaaagaaaaaagcagctgtcggtgtcagaggaattaag
cttcagaagaaggatgaattagaagaagtttatctttttgaagaaggaacagagacgaag
attacttatggagaaaagacagtttcactgaaccgcctgaaactggcgaaacgggatgga
acaggaaccaaaagccgctag
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