Ruminococcus torques: RTO_19540
Help
Entry
RTO_19540 CDS
T02606
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rto03016
]
RTO_19540
Enzymes [BR:
rto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RTO_19540
Transfer RNA biogenesis [BR:
rto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RTO_19540
Prokaryotic type
RTO_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
CBL26497
UniProt:
D4M5I5
LinkDB
All DBs
Position
2028319..2029245
Genome browser
AA seq
308 aa
AA seq
DB search
MINGIVNIYKEKGYTSHDVVAVLRKVVGQKKIGHTGTLDPDATGVLPVCLGRATKVCELL
TDHDKTYEALLLLGKTTDTQDISGEVLEERDPGDLTEEEVRSCIESFIGEYDQIPPMYSA
LKVNGKKLYELAREGKTVERKSRKVQIHGIRILEMNLPHVRMEVDCSKGTYIRTLCHDIG
EKLRVGGCMEELERTKVGRFLKEDAVTLDEVRQKMKQGEGAELFTPLDQIFAELPAVTVM
DAKAWMSYNGNDLPERFLLEKEAWTDGQEVRVYDSRKNFIGLYQYRAPKKLFHIKKMFLD
PEAEKIEK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggaatagttaatatttacaaagaaaaaggatatacttcccatgatgtggtt
gcagttcttcgaaaagttgtcggacagaagaagatcggtcatacaggtacgcttgatccg
gatgcaacgggagtccttccggtgtgtcttggaagagcaacaaaggtttgtgagcttctg
acagatcatgataagacatatgaggctctgctgcttttaggaaagacgacagatacgcag
gacatttccggagaggttctggaggagagggatccgggcgatctgacggaagaggaagta
cgttcctgtatcgaatcatttatcggagaatatgatcagattccgccgatgtactctgcg
ttgaaagtgaatgggaagaagctttatgagcttgcccgtgaaggaaagaccgtggagcgt
aagagcagaaaagtccagatccatggaattcgcattctggagatgaatcttccgcatgtg
cgtatggaggtggactgttctaagggaacatatatccgtactttgtgccatgacattgga
gagaaacttcgggtgggcggctgtatggaagaacttgagcgtacgaaagtcggccgtttc
ctgaaagaagatgcagtaacactggatgaagtgcgacagaagatgaaacagggagaaggt
gcagaacttttcactcctctggatcagatcttcgcggaactgccggccgttactgtgatg
gatgcgaaggcgtggatgtcttataacggaaatgatcttccggaacgttttctgttagaa
aaagaagcgtggacagatgggcaggaagtcagagtatatgattccagaaagaattttatc
ggcctttatcagtatcgtgcaccgaagaagctattccatattaagaaaatgtttctggat
cctgaagcagagaaaattgagaaataa
DBGET
integrated database retrieval system
