Ruminococcus torques: RTO_19700
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Entry
RTO_19700 CDS
T02606
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rto
Ruminococcus torques
Pathway
rto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RTO_19700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_19700
Enzymes [BR:
rto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RTO_19700
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RTO_19700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CENP-T_C
Fe-ADH
RMI2
Motif
Other DBs
NCBI-ProteinID:
CBL26509
UniProt:
D4M5J7
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All DBs
Position
2040598..2041830
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AA seq
410 aa
AA seq
DB search
MKNVYTVKQVNSYIKNMFTQDFMLNRIYVKGEVSNLKYHTSGHIYFSLKDESGTIACVMF
AGSRSGLSFHMEEGQQVVVLGAVSVYERDGKYQLYAREIILDGAGLLYERFEALKKELEE
MGMFAAEYKQPVPRYARTIGVVTAPTGAAIRDIINVAKRRNPFVQILLYPALVQGDGAVS
SIVKGIRMLEEKQVDVMIVGRGGGSIEDLWAFNEEAVARAIFDCRVPVISAVGHETDTTI
ADYVADLRAPTPSAAAELAVYEYSEVKEQILNCESLLRRAINQKLLNERVHLEHSRLKLQ
TLHPRQKLNEKRQRTVDAENTLRSLMERHLTKEKHRLALCAERMKGLSPLEKLSQGYSYV
CNAQGQNIKKTDQVREGDLLQIYVTDGQIETYVTDTVKLEGERGQSSHKQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtctatacggtgaagcaggttaattcttatattaagaatatgttcacccag
gacttcatgctgaaccgaatctatgtaaagggtgaggtgtctaatttaaagtaccacaca
tcagggcatatatatttttcattgaaagacgagtccggcacgatagcctgcgtgatgttc
gcaggctcaaggtctgggctttcttttcatatggaggaaggacagcaggtagtagtgctg
ggggcggtcagtgtctatgagcgggatggaaagtatcagctgtacgcaagagagatcatt
ctggacggtgcgggacttttgtatgaaagattcgaggcactgaagaaagaactcgaagag
atgggaatgtttgcagcagagtacaaacagccggttccacgctatgcacgtacgatcggg
gttgtgaccgcaccgacaggagcagcgatcagagatatcatcaatgtggcaaagagaagg
aatccatttgtccagatcctgctttatcctgcactggtacagggtgatggtgccgtgagc
agcatcgtgaaaggaatccgtatgctggaagagaagcaggtggatgtcatgatcgtcgga
agaggcggaggaagcattgaagatctgtgggcattcaatgaggaggctgttgcacgtgcg
atttttgactgtcgcgttccggtgatctctgcagtcggacatgagacagatacaacgatt
gccgattatgtggcagacttaagagcaccgacaccatctgcagcggcagagcttgcagtg
tatgaatattccgaagtgaaagaacagattcttaattgtgagagtttacttcgaagagca
ataaatcagaagttgctaaacgagcgtgtgcatttggaacacagcagattgaaacttcag
acactccatccaagacagaaactcaatgagaagagacaaagaacggttgacgctgagaat
acactgcgctcgcttatggagcggcatctgacaaaagaaaagcacagactcgcactttgt
gcagaacggatgaagggattgtctccacttgagaaattaagtcagggatattcttatgtc
tgcaatgcacaaggacagaatataaagaaaacagatcaggtaagagaaggagatttgttg
cagatttatgtaacggatggacagattgagacttacgttacagacactgtaaaactagaa
ggggaaagaggacaaagttcccataagcagtaa
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