Ruminococcus torques: RTO_28260
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Entry
RTO_28260 CDS
T02606
Name
(GenBank) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rto
Ruminococcus torques
Pathway
rto00020
Citrate cycle (TCA cycle)
rto00190
Oxidative phosphorylation
rto00650
Butanoate metabolism
rto00720
Other carbon fixation pathways
rto01100
Metabolic pathways
rto01110
Biosynthesis of secondary metabolites
rto01120
Microbial metabolism in diverse environments
rto01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RTO_28260
00650 Butanoate metabolism
RTO_28260
09102 Energy metabolism
00190 Oxidative phosphorylation
RTO_28260
00720 Other carbon fixation pathways
RTO_28260
Enzymes [BR:
rto01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RTO_28260
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
DAO
FAD_oxidored
NAD_binding_8
Thi4
AlaDh_PNT_C
Lycopene_cycl
F420_oxidored
Pyr_redox
FAD_binding_3
3HCDH_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
CBL27264
UniProt:
D4LZQ4
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Position
2938759..2940303
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AA seq
514 aa
AA seq
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MSKTIIIIGAGLAGLSAALQAAENGCNVKLVSSLPSERAQSVMAEGGINAALNTKDENDS
PEEHFTDTIKAACGLADPNAVWGMTQAAPELVHWLLKLGVKFNMSGYDDVDLRNFGGQKK
KRTAFAQSDTGKQIMTAMIDAVRRKEASGMVERFSHHSFLTLRLCGNICCGCVIRDEYSQ
ETVELPGDAVIVATGGMHGLFGNTTGSLSNTGEVTAELFRLGVPLANGEMIQYHPTTVKC
GGKRMLISEAARGEGGRLFAMKDGKQWYFMEEKYPELGNLMPRDITAREIWKVSHESEVF
LDMTEISEEIISNKLSGLADDCMTYLHKDIRKEPVSVLPGIHYFMGGILVDEQHRTPIQN
LYAAGECCAQYHGANRLGGNSLLGALYGGRVAAKSACEQADVVDLSCATQIDFPPASQIS
EIKQLNKVMQETMGVVRNENTLLNGIQTVQALTGNLPLLGMAVLKSALARKESRGAHWRE
DYPKSNDDDYLKTTVARFDGKQIQISFVPVPERR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacaattattattataggtgctggactggcaggactttcagcggctttgcag
gcagcggaaaatggatgcaatgtaaaactggtttcctcccttccgtcagagcgggcacag
tctgttatggcggagggcggtatcaacgcagctttgaatacaaaagatgaaaacgacagt
cccgaagaacattttacagatacaataaaggcagcatgtggtctggcagatccaaatgca
gtttggggaatgacacaggcagcaccggagctggtgcactggctgctaaaacttggagtt
aaatttaacatgagtggctatgatgatgtggatctgcggaattttggcgggcagaaaaag
aaacggactgcttttgcacagagcgataccgggaagcagatcatgacagctatgatagac
gctgttcgcaggaaagaagcatctggtatggtagaacggttcagccatcattctttccta
acacttcgtctgtgtggcaatatttgttgtggctgcgtaatcagggatgaatacagtcag
gagactgtggaattaccgggggatgcggttattgttgccaccggtggtatgcacggattg
tttggaaatacaacgggttcgctgagcaatacaggagaagtcaccgcagaattgttccgg
cttggtgttcctctggcaaatggcgagatgatccagtatcatccgacaactgtgaaatgt
ggtggaaaacgcatgctcatcagcgaggcggccagaggggaaggtggcaggttgtttgcc
atgaaagatggaaaacaatggtatttcatggaggaaaaatacccggagcttggaaatctg
atgccacgagatattaccgccagagagatatggaaggtcagccatgaatcagaggtattt
cttgacatgacggaaatatcggaggagattatttcaaataagctatctggtctggcagac
gattgtatgacctatttgcataaagatatacgaaaggaaccggtgtctgttttaccggga
attcactattttatgggaggtattctggtggatgagcagcacagaacgccgattcagaat
ctttacgctgccggagaatgctgtgcccaatatcatggtgccaaccgtcttggtggaaat
tctctgttaggagcgttatacggaggacgtgttgcggcaaaatcagcatgcgaacaggca
gatgtagtagatctatcttgtgcgacacagatagattttccaccagcgtcccaaatttca
gaaataaagcaattaaacaaagtgatgcaggagactatgggcgttgtcagaaatgagaat
acgttgttaaatgggattcaaacggtacaagcgctgacaggaaatcttccattgcttggc
atggcagttctaaagagtgctcttgcaagaaaagaaagccgtggtgcacactggcgggag
gattatccgaagagcaatgacgatgattaccttaaaacaacggtagccagatttgatgga
aagcagatacagatttcctttgtacctgttccagaaaggcggtga
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