Ruminococcus torques: RTO_28580
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Entry
RTO_28580 CDS
T02606
Name
(GenBank) Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
rto
Ruminococcus torques
Pathway
rto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RTO_28580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_28580
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RTO_28580
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RTO_28580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_4
SLFN_AlbA_2
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
CBL27292
UniProt:
D4LZT2
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All DBs
Position
complement(2965264..2966676)
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AA seq
470 aa
AA seq
DB search
MIEQLIAEATECDFKVALETKKPKSWLKSVSAFSNGIGGTLFFGVSDDREPIGLSDVQKD
AEAISRLIKERITPLPQFILKPLQEDGKNLLALEVSPGRSTPYYYKADGVMEAYIRVGNE
SVIAPDYIVNELILKGTNQSFDTLTTEAVKKDYSFTLLEATYLERTGLRFEPSDYVSFGL
ADKNGFLTNAGKLMTDQHTVYNSRMFCTRWNGLEKGSIFDDALDDKEYEGNLIYLLKSGS
EFIRNNSKVRFVKEAQYRVDKPDYAERAVTEALVNALIHRDYIVLGSEVHIDMFDDRVEI
TSPGGMFGGGSIQEYDIYSIRSMRRNPVIADLFHRMKYMERRGSGLRKIVSETEKLPGYT
AAYKPEFSSTATDFRVILKNVNYNLEGDAHQVIHQVTHQVIELSTVSKQILTFCTTPKSK
KELAVFCGFKDLRNFTLKHINPLLESGQLEMTIPDKPKSRNQKYITVRSE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagctcattgctgaagcaacagaatgtgatttcaaagttgctctcgaaaca
aaaaagccaaaaagctggttaaaaagtgtcagtgccttttccaatggaattggcggcact
ctgtttttcggagtctccgatgaccgggagcctatcggcttgtcagatgttcaaaaggat
gctgaagcgatcagccgcttaatcaaagaacgtatcacaccattaccgcagtttatctta
aagccattgcaggaagatggtaaaaacctgttggctctggaggtttctcctggccgcagc
accccatactattacaaggcagacggagtaatggaagcatacatccgtgttggaaatgaa
agcgtaattgcaccggattacattgtgaatgaactgatcttaaagggaaccaatcagtcc
tttgacaccttaacaacagaagctgtgaaaaaggattacagctttacactcctggaggca
acctatctggaacgaaccggcctccgcttcgaaccatccgattatgtctccttcggtttg
gctgacaaaaatgggttcctgaccaatgccggaaaactcatgaccgatcagcacacagtt
tataactcccgtatgttctgtacccggtggaatggcttggaaaaaggctctatctttgat
gatgcgctggacgataaggaatacgaggggaatttgatttatttactgaaaagcggcagt
gaatttattcgcaataattccaaagtccgttttgtcaaagaagctcagtatcgggtagac
aagccggattatgctgaacgagctgtaacagaggctcttgtcaacgctctcatccatcgt
gattatattgtgcttggcagcgaagtccacattgatatgtttgatgatcgggtggaaatc
acatctccgggcggtatgtttggtggcggctcaattcaggaatacgatatttacagtatt
cgttcgatgcgacgaaaccctgtgattgctgacctgttccaccgcatgaagtacatggaa
cgccgtggaagtggcctacgcaaaatcgtcagtgaaactgaaaagctgcctggatacaca
gcggcatataagcctgaattttcctcaacagcgacagatttcagagtcatcttgaaaaat
gtaaactacaacttagagggtgacgcccaccaagttatccaccaagttacccaccaagtt
attgaactatcaacggtatccaaacagattttgactttttgcacaacaccaaaatccaag
aaagagcttgcagtattttgcggcttcaaagatttaagaaacttcactttgaaacatatc
aatccgcttttagaatccgggcaattagaaatgactattcccgataaacctaaaagtcgc
aatcaaaaatatattacagttcgttccgaataa
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