Ruminococcus torques: RTO_29090
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Entry
RTO_29090 CDS
T02606
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RTO_29090
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
Zn_ribbon_recom
Atg11_middle
DUF6115
MutS_III
CBP4
Motif
Other DBs
NCBI-ProteinID:
CBL27330
UniProt:
D4LZX0
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Position
3002630..3004321
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AA seq
563 aa
AA seq
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MARKSRKNIPEVVGSATVQTEMSRPFRAGLYARISMETEETLERGTIETQVELMKNFVAD
TEDISVAEVYKDSDYSGTNFDRPGFVQMMEDIKHGKINCVIVKDLSRLGRNYVETSNYIE
RVFPFFHVRFLAVTDDFDSFREGVDLTVPLKNIINEFYSKDLAKKSSSAKKALWKKGKFT
SAWEPYGYRKSEEDHHQLIVDEEAAEHLKSIFSMYMDGRNYSDIARQLNKDGVLSPTLQR
KFYKTGEKPLPESKPWNNYEVKRVLQDVHCTGDSVFGKYQQSVFQGNKQRNRPESEWVHV
ENTHEGIIDRELFQQVQSKIQEYTEAYKKKHQQNNGAIRNHNFYTGKIWCGGCGNRMTLS
RERNGTFFYICGANTNHKSGGKQCKGHRVRKEYVDDDVLRLIQTHMKTVLDTEKMIQKMN
AASKNQTQYLLLDKEVGKLRRELSRISKRKSDLYEDYSERLITEEEYIQFSRIYSNEIEN
IKSRLDTVLAAQVRYSQDYHIEEGWGNVIHTYMSKRKLTKEMADAFVDSIIIHGKYDYEI
KLVYDDQFADLQKLKKEKEAQSR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaagagcaggaaaaacattccggaagtagtcggcagtgcaaccgtccagaca
gagatgagcagaccattccgggcaggattgtatgccagaatttcaatggaaacagaagaa
acattagaaagaggaacgatagaaacccaggtggaattgatgaaaaactttgtagcagat
acggaagatatttcggttgcggaagtttataaggactcagactattcaggtacaaatttt
gaccgtcctggattcgtacagatgatggaagatatcaagcatggaaaaatcaattgtgtt
attgtaaaagatttgtccagacttggaagaaattatgtcgaaaccagtaattatattgaa
cgagtattcccgtttttccatgtaagattcctggctgtgacagatgatttcgattccttc
agagagggtgtggatcttacagttccactgaagaatattatcaatgagttctattcgaaa
gaccttgccaaaaagagcagcagcgcaaaaaaagctctttggaaaaaaggaaaatttaca
agtgcctgggaaccgtatggttacagaaagtcagaagaagaccatcatcagctgatcgtt
gatgaagaagctgcagaacatttgaaaagtatattttctatgtatatggatggcaggaac
tatagtgatattgcaagacagctcaataaagatggagttttatcgccgactttacagaga
aaattctataaaaccggtgaaaagccgcttccggagtcaaaaccctggaacaattatgaa
gtgaaacgagttcttcaggatgttcattgcacaggtgattctgtatttggaaaatatcag
caaagtgttttccagggaaataaacagagaaatcgaccagagagtgaatgggtgcatgtg
gagaacacgcatgaagggattatagatagagagttgtttcaacaggtacaatctaaaatc
caggaatatacggaagcttataagaagaaacatcagcagaacaatggggctattagaaac
cataatttctatacaggaaaaatatggtgcggaggctgtggcaaccgcatgacgttgtcc
agagaaagaaatggcacattcttttatatctgcggagccaatactaaccataaatccgga
ggaaagcaatgcaaagggcacagagtcagaaaagaatatgtggatgacgatgttcttcgc
ctgattcaaacgcatatgaaaaccgtattggatacagaaaaaatgattcagaaaatgaat
gcagcttccaaaaatcagacacagtacctgcttttggataaagaggtgggaaaacttcga
cgggaactaagccgtatcagtaagcgtaaatcggatttatatgaagactattccgaacgt
ttgattacagaagaagaatacatacagttttctcggatctattccaatgaaattgagaat
atcaagagccgtctggacacagtattggcggcacaggttcggtattcccaggattaccac
attgaagaaggctggggaaatgtgatacatacttatatgtcaaagcgtaagctgacaaaa
gaaatggcagatgcctttgtggattcaattattatccatggtaagtatgattatgagatc
aagctggtatatgacgatcagtttgcagatttacagaaactaaagaaagagaaggaggcg
cagtcaagatga
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