Ruminococcus torques: RTO_30150
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Entry
RTO_30150 CDS
T02606
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_30150
03036 Chromosome and associated proteins [BR:
rto03036
]
RTO_30150
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_30150
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RTO_30150
Chromosome and associated proteins [BR:
rto03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RTO_30150
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RTO_30150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-DNA_bdg
HU-CCDC81_euk_2
SIS_2
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
CBL27421
UniProt:
D4M061
LinkDB
All DBs
Position
3112099..3112371
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTEFIAAVAEKAEISKKDSEKALKAFVDVVTEQLKAGDKVQLVGFGTFEVSERAAREG
RNPQTGKTMTIAACKAPKFKAGKALKDAIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaatttattgcagcagtagctgaaaaggcagagatttccaagaaagat
tccgagaaagcattaaaggcatttgttgatgttgtaacagagcagctgaaagcaggagat
aaagtacagcttgttggatttggtacatttgaagtgagcgagagagcagcaagagaagga
agaaacccacagacaggaaaaactatgacaatcgcagcttgcaaggctcctaaattcaaa
gctggaaaagcattaaaggacgctatcaactag
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