Ruminococcus torques: RTO_30410
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Entry
RTO_30410 CDS
T02606
Name
(GenBank) birA, biotin-[acetyl-CoA-carboxylase] ligase region
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
rto
Ruminococcus torques
Pathway
rto00780
Biotin metabolism
rto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RTO_30410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rto03000
]
RTO_30410
Enzymes [BR:
rto01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
RTO_30410
Transcription factors [BR:
rto03000
]
Prokaryotic type
Helix-turn-helix
Other families
RTO_30410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_24
BPL_C
HTH_23
GntR
BPL_LplA_LipB_2
HTH_IclR
MarR_2
HTH_28
HTH_29
DUF7343
HTH_DeoR
WHD_BrxR
HVO_A0261_N
Fe_dep_repress
MarR
HTH_5
HTH_Crp_2
HTH_Tnp_4
TrmB
HTH_36
Motif
Other DBs
NCBI-ProteinID:
CBL27445
UniProt:
D4M085
LinkDB
All DBs
Position
3136818..3137810
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AA seq
330 aa
AA seq
DB search
MKAEILKLLREADGYVSGQQLCEKFGVSRTAVWKVIRQLQEEGYQVEAVRNKGYHIVDSP
DVMTKEELDSLMDTQWAGRNIVYYDSVDSTNLRIKQMGDEGAPEGTLAVADKQTAGRGRR
GRSWDSPSGSSIYMSLLLRPKIEPDQAPMLTLVMALSVAEGIMDCGDSCGNPDVKIKWPN
DIIINGKKLVGILTEMSTQIDYINHVTIGVGINVNLTEFPEEIRETATSLRLECGHVVKR
APLIAAVMKRFEQNYTIFLEHGDLSGLKERYSELLVNKDREVRILGAKEQYNAYALGINQ
TGELIVRKEDGTEEAVYAGEVSVRGVYGYV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgaaatattaaaattattgagggaagcggacggatatgtgtcaggccagcag
ctttgtgaaaagttcggggtgtcaagaactgcagtctggaaggtgatccgtcagctgcag
gaagaaggatatcaggttgaagctgtgcggaataaaggttatcatattgtagatagtcca
gatgtgatgacgaaagaagagcttgatagcctgatggatacgcagtgggccggaagaaac
atcgtttattacgattcggtagattctacaaatctgaggatcaagcagatgggagatgaa
ggtgcaccggaaggtacacttgcggtagcagataagcagacagccggaagagggagaagg
ggccgttcctgggattcaccgtcaggttcaagcatttacatgtccttgttgcttcgtccg
aagattgaaccggatcaggcgccgatgctgacgcttgtgatggcattaagtgtagcagag
ggaatcatggattgcggagattcctgtggaaacccagatgtaaagatcaagtggccaaat
gatattatcattaatggaaagaagctcgtcggaatcctgacagagatgagcactcagatc
gattacattaatcatgtaacgattggtgtagggatcaatgtgaacctgacagagttccct
gaggagatccgtgagacagcgacatcactcagacttgaatgtggacatgtggtaaagaga
gcaccgttgatcgcagcagtgatgaaacgctttgaacagaactacacgattttccttgaa
catggagatctgtccggtctgaaagaacgttatagcgaattactggttaataaagaccgt
gaggtccggattcttggcgcgaaagaacagtacaatgcttacgcacttggaatcaatcag
acaggggagttgattgttcggaaagaagatggaaccgaagaggcggtgtatgccggagaa
gtttcggtgcgcggcgtatatggatatgtataa
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