KEGG   Ruminococcus torques: RTO_30930
Entry
RTO_30930         CDS       T02606                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rto  Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:rto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rto02048]
    RTO_30930
Enzymes [BR:rto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RTO_30930
Prokaryotic defense system [BR:rto02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RTO_30930
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C DUF87
Other DBs
NCBI-ProteinID: CBL27487
UniProt: D4M0C7
LinkDB
Position
3190116..3193256
AA seq 1046 aa
MANFNEHALEMSIMELFKDEGYTYVSGDQIHRERTEVLLTDDLKQYLYNRYAKDGITPSE
VDSVILMLRNISGTIYEANKAVFKLLCDGFILNREDRTQKDLYIELIDFDTPENNIFKVV
NQFEIEGVNNQLRIPDGIVFVNGIPVVVLEFKSAVQENTTIMDAYKQLTIRYRRDIPEIF
KYNAFVVISDGANNKYGSFFSPYDFFYAWRKINSDDKELDGINSLVTMIKGLFRKDRLLE
VIKDFIYFPDNSDKDLKIVCRYPQFFAANKLYENIKAHLRPEGDGKGGTYFGATGCGKSY
TMLFLTRMLMKSKYFSSPTILIITDRTDLDDQLSKQFVGSKKYIGDETVVSIESREKLRE
ELQGRESGGVYLTTIQKFTEDLQLLTDRTNVICISDEAHRSQINLDQKVKITESGVQKTY
GFAKYLHDSLPNATYVGFTGTPVDGTIEVFGGVVDAYTMTEAVKDGITVNLVYDGRAAKV
MLNQDKVRQIEEYYAQCELEGANEHQVEESQKAVAKMEVIIGDPDRLRAVAEDFIKHYET
RVAEGATVAGKAMFVCSNRNIAYDFYKIVKELRPEWTEKKICDDGVVLSEKDKKELKPME
KIKLVMTRNKDDEKDLFDMLGTKEDRKEFDRQFKNPKSNFKIAIVVDMWLTGFDVPELDT
IYIDKPIQQHTLIQTISRVNRVCEGKDKGLIVDYIGIKKNMNTALKKYTNFESEEFEGVE
QSITIVKDQLEVLGQMFHNFNSSDFFNGSPTEQLACLNRAVEYVQLSEELERRFMAAVKR
MKQAFNLCSSSEKFSDEDKDYIHFYCAVRSILFKLTKGDAPDIEQMNARVRKMLEGAIQS
DGIEELFETGKHISVDIFSDEYMDKINAIQLPNTKIKILQRLLSQAIDEFKKVNKIMGVE
FADRLKKVVDEYNNRRRDEAYANEVLDDVAEQLAQLLSELKTEKNSFKNMGIDYEEKAFY
DILKAVSKKFEFEYPDDKMIELSKRIKLIVDDKSRYTDWSARDDIKANLQVDLILLLDEF
GYPPVTIDDVYKEVLEQAENFKKYAQ
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggcaaattttaatgaacacgcattggaaatgtcaataatggagttgttcaaagacgag
gggtacacctatgtcagcggcgaccagatacatagagaaaggacagaggttttgcttacg
gacgacctgaagcaatacctctataatcgctatgcgaaagatggtatcacaccgagtgag
gtggatagtgtcattctaatgctgcgtaatatttccggtacgatttatgaagcaaacaaa
gctgtatttaagttgctctgcgatggatttattcttaaccgtgaggatagaacgcagaaa
gacctctatattgaacttattgatttcgacactcccgaaaacaatatattcaaagtggtt
aatcagtttgaaattgaaggcgtaaataatcagttgcgtattcctgatggcattgtgttc
gtaaatggtattcctgttgttgttcttgaatttaagagtgcggtacaagagaatacgacc
ataatggacgcatataagcagcttacaatccgttaccgtagagatattccggagattttc
aaatacaatgcgtttgttgttatcagtgacggagcaaataataaatatggttctttcttc
agcccatatgatttcttctatgcgtggagaaagataaactcagacgataaagaactggac
ggtatcaattctcttgtaacaatgataaagggacttttccgaaaagaccgtttgcttgaa
gttatcaaagattttatttattttccggataactcagataaggatttgaagatagtgtgc
cgttatccacagttctttgcggcaaataaattgtatgagaatatcaaggctcatcttcgc
cctgaaggagatggtaaaggtggtacatacttcggagcaacagggtgcggcaagagttat
acaatgcttttccttacccgtatgctgatgaaaagcaaatacttttcttccccgactatt
ctcattattacagacagaacagaccttgatgaccagctttccaaacagtttgtaggttca
aagaaatatatcggagatgaaactgttgtaagtattgagtcccgtgagaaacttcgtgag
gagcttcaaggacgagagagtggcggtgtttatctgactaccattcagaaatttacagag
gatttgcagcttcttacagacagaacgaacgttatttgtatttctgatgaagcacacaga
agccaaatcaatctcgaccaaaaggttaagattacagagtcaggtgttcagaaaacctat
ggctttgcaaagtatctgcacgactctttaccaaatgcaacttatgttggatttaccgga
actccggttgatggaacaatcgaagtctttggtggtgttgtagacgcatatacaatgacg
gaagctgttaaggacggtattacagttaatcttgtttacgatggtcgtgcagctaaggtt
atgcttaatcaggacaaggtaagacagattgaagaatattatgcacagtgtgagcttgag
ggagcaaatgaacatcaagtagaagaaagtcagaaagcagttgctaaaatggaagttatt
attggcgaccctgatagacttcgtgctgttgcggaggattttatcaagcattatgaaacc
cgtgtggcagaaggtgcaaccgtagcaggcaaagcaatgtttgtatgttccaaccgaaat
atagcatacgatttctataaaatagtaaaggaactcagaccggaatggacagaaaagaag
atttgtgatgacggggttgttctgagtgaaaaagataaaaaagagttgaagccaatggaa
aaaattaagttggttatgactcgtaataaagatgatgaaaaagacctctttgatatgctt
ggcacaaaagaggataggaaagaatttgaccgtcagttcaaaaatccgaagtcaaacttt
aagattgccattgttgtagatatgtggctgactggttttgatgtgccggagcttgatacg
atttacattgataagcctattcagcagcatacccttattcagacgatttcccgtgtaaat
cgtgtatgcgagggcaaggataaaggcttgattgttgactacataggtatcaaaaaaaac
atgaacactgccctcaagaaatatacgaattttgagagcgaagaatttgaaggtgtggag
cagtctatcacgattgtaaaagaccagttagaagttcttggtcagatgttccacaacttt
aacagtagtgatttcttcaacggttctcctactgaacagcttgcctgcctgaatcgtgca
gttgagtatgtgcagttgtctgaagaactggaaagaagatttatggcagcagtcaagaga
atgaagcaggcatttaatctttgtagttcaagtgagaaattctctgatgaagataaggat
tatatccatttttattgtgctgtccgttctattcttttcaagttgacaaaaggcgatgca
ccggatattgagcagatgaacgctcgtgtccgcaaaatgcttgagggtgcaattcagtct
gatggcattgaggaattatttgaaaccggaaagcatatatcggtggacattttcagcgat
gagtatatggataagataaatgctattcagttgccgaatacgaaaatcaagatacttcaa
agacttctttctcaggcgattgacgagtttaagaaagtcaataagattatgggtgtggaa
tttgcagacagactcaagaaagttgttgatgagtataataaccgtcgtcgtgatgaagcg
tatgccaacgaagtccttgatgatgttgcggagcagcttgcacagttgttgtctgaactg
aaaacagaaaagaactccttcaagaatatgggtatagattatgaagaaaaagctttctat
gatattttgaaagcagtttccaagaagtttgagtttgaatatccggacgataaaatgatt
gaactatccaagaggataaagttgattgttgatgataagtcacgctataccgattggtct
gcccgtgatgatattaaggcaaacttgcaagtggatttgatattgctgcttgatgagttc
ggctatccgccagtaaccattgatgatgtttacaaggaagttcttgagcaggcagagaat
ttcaagaagtatgcacagtaa

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