Rhincodon typus (whale shark): 109910405
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Entry
109910405 CDS
T06055
Name
(RefSeq) rho-related BTB domain-containing protein 2
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109910405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109910405
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtp04031
]
109910405
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109910405
GTP-binding proteins [BR:
rtp04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
109910405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
109910405
NCBI-ProteinID:
XP_048474545
LinkDB
All DBs
Position
40:complement(12414736..12510012)
Genome browser
AA seq
710 aa
AA seq
DB search
MDTNMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
VCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKT
MWYQEIKHFCPRAPVILVGCQLDLRYTDLEAVNRARRPLARPIRHNEILPPEKGREVAKE
LGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQKPLLQAPFLPPKPPP
PLITVPDPPKTNEEHPAHLLANPLCADVILVLQDKVKIYAHKIYLSTSSSKFYDLFLMDL
SEEPESGSERAMSHNDRQGREYLMRAASFDVSESTDEVPTTQPLSNLRASTSDGILKLNA
YDQSARAKSWFKRRKILSSWSRAFISIQEEMAEDPITLNSRLMTVVRMDYSVHPDAFSAV
MHYLYTGQLDENEKELMQIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRANR
VKECLAKGTFSDVVFKLDDGTICAHKPLLISSCDWMAAMFGGPFMESSTKEVYFPNTYKS
CMQAVLEYLYTGQFCSSPDLDAMELIVLANRLCLPHLVALTEQYTVIGLIEATHQGVDID
GDVLLFLEMAQFHCAHQLAEWCLHHICTNYNNVCRKFPREMKAKSPENQDYFEKHRWPPV
WFLKEDDHYQRARKERDKEDYLCQKRQLKRKWFFWNSSSPSTASSSSTVV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaacatggactacgaaagaccaaacgtagaaaccatcaagtgtgtggtcgtg
ggcgacaacgcagtagggaagaccaggcttatctgtgcaagagcatgtaatgccactctg
acacaataccaactattggccactcatgtaccaacagtctgggccattgaccagtaccgt
gtgtgccaagaggttctggaacgttcacgcgatgtggttgatgacgtcagtgtttcattg
cggctctgggatacgtttggtgatcatcacaaggacaggcgctttgcctatggcagatct
gatgtggtcgtgctttgtttctccattgcaaaccccaactctttgcatcacgttaagacc
atgtggtaccaggagattaaacacttctgtccacgtgcccctgtcattttggttggctgc
cagttggacttgcgatacactgacttggaagctgttaatcgtgcacggaggcctcttgca
aggccaatacgacacaatgagattttacctccagaaaagggtcgtgaggtagccaaagaa
ttgggaatcccctattatgaaaccagcgtggtggcccaatttggcattaaggatgtcttc
gataatgccatcagagccgccttaatttccaggcggcatctccagttctggaagtcacat
ctgaggaatgttcaaaagcctttactccaggctccattcctacctccaaagccacctccc
cccctcatcactgtcccagatccccccaaaaccaatgaagagcatcccgctcacctgttg
gccaatcctctttgtgcagacgtcatcctggtgcttcaggacaaggttaaaatctacgct
cacaagatttatttgtctacctcctcctctaaattttatgacttgtttctaatggacctc
agtgaagaaccagagtctggtagtgaaagagcaatgagccacaatgacaggcagggcagg
gaatacttaatgagagctgccagttttgatgtcagtgaaagcacagatgaagttccaacc
acccaaccattatccaatcttcgagcctctaccagcgatggtatcttgaaactcaatgcc
tatgatcagagtgcaagagcaaaatcatggttcaaaagaagaaagattttgtcatcatgg
agcagagctttcatcagcatccaggaagagatggcagaagatcccatcacgttgaacagt
cggctaatgactgttgtcagaatggactactctgttcatcctgatgcattcagcgccgtc
atgcattacttgtacactggccagctggatgagaatgagaaggagctgatgcagatagcc
cacattgcagagctgctggaggttttcgacttgcgtatgatggtcgccaatattttaaac
aatgaggccttcatgaaccaagagattaccaaagcgttccatgtgaggcgggccaaccgt
gtcaaagaatgccttgccaaagggaccttctcagatgtggtttttaagctagatgatggg
acgatctgtgcacataagcccttgctgatttccagctgcgactggatggctgcaatgttc
ggaggtccgtttatggaaagttcgactaaggaggtgtactttccaaacacatacaagagc
tgcatgcaagctgtgctggaatacctgtacacgggacagttctgttctagcccagacctg
gatgccatggaactcattgtgctggcaaatcgcctctgtctacctcacctggtagcatta
acagagcagtacacagtaattggcctgattgaagcaacacaccagggtgtagacatagat
ggagatgttctcctgttcctggaaatggctcagttccactgtgcccatcaactcgctgaa
tggtgcctgcatcacatctgtacaaactacaacaacgtatgtcgcaagtttcccagagaa
atgaaggcaaagtctcctgaaaaccaggactactttgaaaagcatcgctggcctcctgtc
tggttcctaaaagaggatgatcactaccagcgagctaggaaggaacgtgataaagaggat
tacttgtgccagaaacgccagctcaagcgcaagtggtttttctggaattcaagttcacct
tccacagcctcgtcctcctccactgttgtttga
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