Rhincodon typus (whale shark): 109910412
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Entry
109910412 CDS
T06055
Symbol
mef2aa
Name
(RefSeq) myocyte enhancer factor 2aa isoform X1
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109910412 (mef2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109910412 (mef2aa)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
109910412 (mef2aa)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
109910412
NCBI-ProteinID:
XP_048471841
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Position
33:complement(12922382..13133958)
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AA seq
468 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPEPDSSYVLTPHTEEKYKKINE
EFDNMMRNHKLAPGLPPQNFAMPVAVPVSNPNNLTYSHPSSSLVTHSLVTTSLTDTSMLS
PPQATLPRNVVSPGAPQRPPSAGSAGGMMGDLTMPNGAGTSPVGNGFVNPRASPGLLCST
GGNGLGKVMPTKSPPPPGGNVAMNNRKPDLRVVIPPTSKGMMPPLNVQRISSSQSTQALA
TPVVSVTTPSLPPHGLLYSTYNTDYSLTSADLSTLSGFSSPGTLSLGPVSAWQQHHLGPA
TLSSLIVNSQSLQGSNLSTNTNQNVNIKSEPTSPPRDRMTPSGFPQQSRHDTGRSPVDSL
SSSSSSYDGSDREDPRGDFHSPIGLARPSTDDRESPSVKRMRMDTWVT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaaaaagattcagattacaaggattatggatgaacgtaacaggcaggtgacg
ttcacaaagagaaaatttggattaatgaagaaagcctatgaactgagtgtactgtgtgac
tgtgagattgctttgataatattcaacagttcaaacaaattgtttcagtatgctagcact
gacatggacaaagttttactcaagtacacagagtataatgaaccccatgaaagcagaacc
aattctgatattgttgaggcacttaacaagaaagaacacagaggttgcgacagtccagag
cctgactcatcatacgtgctcaccccacacacagaggaaaaatataaaaaaataaatgaa
gagtttgataacatgatgaggaatcacaaactcgcacctggtttgccgccgcaaaacttt
gcaatgccagttgcagttccagtgagcaacccaaataatctaacctacagccacccaagc
agctctcttgtaactcattcattggtaaccacatctctaacagataccagcatgctttcg
cctcctcaagctacactgcccagaaacgttgtgtcaccaggggctccgcagagaccaccc
agtgctggtagtgcaggtggaatgatgggtgaccttacaatgccgaatggtgcaggcacc
agccctgtgggaaatggttttgttaaccctcgtgcttcgcctggcctgctgtgctccaca
ggtgggaatggattaggaaaagtgatgcccacaaaatcaccacctcctcctggtggaaat
gttgcaatgaataatcgcaagccagacctacgtgtggtcattccaccaacaagcaagggc
atgatgccacctctgaatgtacagaggataagcagttcacagtcaacacaggctcttgca
actccagtagtgtctgttactactccaagtctaccaccacatggtctgttgtactccact
tacaacactgattattcactaaccagcgctgacttgtctacactatcaggattcagctcg
ccagggacattgtcattagggccagtgtctgcttggcagcaacatcatcttggaccagct
accctcagctcactaatagttaacagtcaatcacttcagggttcgaacctctcaaccaac
accaaccagaatgtcaacattaaatcggaaccaacctcaccccctcgagaccggatgacg
ccttcaggtttccctcagcagtcccgacatgacacgggacgttcgcccgttgatagcctg
agcagctccagcagctcgtacgatggaagtgaccgcgaggaccctcggggtgactttcac
tctcccattggactcgcaagaccatccacagatgatcgagaaagcccatccgtaaaacgt
atgcggatggacacatgggtgacataa
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