Rhincodon typus (whale shark): 109910495
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Entry
109910495 CDS
T06055
Symbol
phf20l1
Name
(RefSeq) PHD finger protein 20-like protein 1 isoform X1
KO
K18402
PHD finger protein 20
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109910495 (phf20l1)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109910495 (phf20l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_2
Tudor_3
PHD
MBT
DUF4537
SH3_Hsr9
Tudor_4
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
109910495
NCBI-ProteinID:
XP_048451482
LinkDB
All DBs
Position
4:95160466..95276082
Genome browser
AA seq
1170 aa
AA seq
DB search
MSRNPPSRPGIAFVVGARLEAQDYLQKWYTSRIEKIDYEEGKMLIHFERWSHRYDEWIYW
DSHRLRPLEGQSLRKDALKDDEEITDFKTGDEVLARWTDCRYYPAKIEDINEEGTYTVQF
YDGVIRSLKRMHIKSMPEDAKGQDWLALVKAATAAAAAAKNKTVGKPRVNKEKVGRKVGR
GSHFKKGRVMSEVKEPVDEVHKKPEELASFAISGNSEPLTFEPKQTLGHAETSGARKRKT
NVICSFQAKRARLNKITGLLASKAVSGDGSEMLEDGIGSHHVPDQLSPSYTTDQLKTEVS
SEDSCTLNQKSDPFFSSPHSTKLQIQKTKPEEPSGNIEASDPFPPPTVPQGKELHNIEFP
QTLPPPPPSDIPQTGPSQPSSPITWLEKSKRRRRSARLANAAGIDGPTDQGYLPSPSSDL
TGQSGKSNNLTDSNIPEDSDGYQLPRESNSFEISDLVPLDLSQHSRHKTSASVSSLQLPG
KEQTLKPRSKVITDVSVASSSSVTNAKNAEDPLAPKEPIIELDHNKFKCRFPRCFKAFRK
AKLLDYHIKYYHNTEKGSDSETSTLESGMRTRASSTNVPPSIVDSLWLKSPRPLSSSSPP
SNLLALQLEMPLDISHKPSKVCKKKRSSVSVSPEGTNNQPNIPVKEKSMETVHERILKKC
IDRDRNAEVGVKSERKMKCEEKNSSPGKKKEKCKEKKGKEHIKLKQKKKKKKKKRSKYEL
LDYEGLKDISLEFLERCSSPLAKYRSSLTLRCGSIVKPGYLSPKFLLSSGSLMELSTDHT
PRHESLSDEEFFDGSSTESALLSEDYSQDLDISTNPEESQEEDENNATVRCVCGMDEENG
FMIQCEECLCWQHSICLGLLEDSIPDQYICYLCQDPPGQRWNAKYCYDQEWLKNGHMYGL
SFLKENYSQQNAKKMVSTHQLLADVYSVTEVLHGLQLKINILQSRKHPDLHLLVQSCKKS
TQEQTTGEKLMECTDSIKQAESICHNQSHRERPSPSKRVEGTYITSEHSYQKPQGCNLEQ
NPTTDQNCSEDEDTNNLNYKADQNSIFNGVERHTIQEMGILTGEGPTGTKETVTVSNDGD
CDGMAREGHVNPQFPWQLNLLTQIEAVQNEVNSRMDFIEKELNVLESWLDFSGELEPPEP
LARLPQLKRHIKQLLTDLGKVEQMATCCSL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaatcccccaagtcggccaggaattgcttttgtggtgggagctcgtttggag
gctcaggattatctgcaaaaatggtatacatcacgaattgaaaagattgactatgaggaa
gggaagatgctgatccactttgagagatggagccatcggtatgatgaatggatttactgg
gatagtcatcgcctacgaccacttgagggacagtcactacgaaaagatgcactcaaagac
gatgaagagattacagacttcaaaactggagatgaggttcttgcccgctggacggattgt
cgctactatcctgccaagattgaagacattaatgaggagggtacttacacagtgcagttt
tatgatggagttatacgctctctgaagcgaatgcatataaaatcgatgcctgaagatgcc
aaaggacaggactggttagctcttgttaaagctgctacagcagcagctgctgctgcaaag
aataagacagtcggaaaaccccgggttaataaggaaaaagtggggagaaaagtggggaga
ggatcccacttcaagaaagggagagtgatgtcagaagttaaagaaccagtggatgaagtg
cacaaaaaaccagaagaacttgcatcttttgctatctcaggaaactctgagccattgacc
tttgagccaaagcagactttaggacatgcagaaacatcaggtgcaaggaagaggaaaact
aatgtcatctgctcatttcaggcaaaaagagcacgtctcaacaaaatcacaggtctgttg
gcctcaaaagctgtgagtggtgacggttcagaaatgctggaagatggtattggaagccac
catgtgcctgatcagctgtcaccttcttataccactgaccagctgaagactgaagtgagc
agtgaagactcctgtactctgaatcaaaaaagtgatccatttttttcatctccacattcg
accaaactccaaatacagaaaacaaagcctgaggagccatctgggaatatagaggcttca
gatccttttcctcccccaactgtacctcagggcaaggagttgcacaatatagaatttcct
cagacattacccccaccaccaccttcagatatccctcagactggcccttctcagcccagc
agtccgatcacctggttagaaaaatccaaacgtaggagacgctctgcacgattagcaaat
gctgcagggattgatggtcccactgaccaagggtatttaccctctccatccagtgatttg
acaggacagtcgggcaaatccaataatctgacagacagcaacataccagaggattctgat
ggttaccagttgcctagagaatctaattccttcgagatcagtgacttggtgcctcttgac
ctctcccagcattccaggcacaaaacctcagcatctgtttcttctcttcaactccctgga
aaagaacaaacactgaaacctcgttctaaagtaataactgatgtgagcgtggcttcctct
tcatcagtaactaatgccaaaaacgcagaggacccattagctcccaaagaaccgatcatt
gagcttgaccacaacaagttcaagtgtagatttcccaggtgcttcaaggctttccgtaaa
gctaagctgctagattaccacataaagtattaccacaatacagagaaaggatctgactcc
gagactagcaccctggagagtgggatgcggactcgtgccagctcaaccaacgtgccacca
tcaattgtggacagcctgtggctgaagagtccgagacctctatcgagttcttcaccacct
tccaatctcctggccttgcagctggagatgcctcttgatataagccacaaaccctccaaa
gtctgcaagaagaagcgatcatctgtgtcagtcagccctgaaggcaccaacaaccaaccc
aacattcctgtgaaggagaagagcatggaaactgtgcatgagaggatacttaagaaatgt
atcgacagagacagaaatgcagaagttggagtgaaaagtgaaaggaaaatgaagtgtgaa
gagaagaactcatcgcctggtaaaaagaaggagaagtgtaaggagaagaaaggcaaggag
cacattaaactaaaacagaagaaaaagaaaaaaaagaaaaagagatccaagtatgaattg
ttggactatgaaggattgaaagatatttccctggagtttttggaaagatgttcgtctcct
ctagccaaatatagaagttccctaaccttacggtgtggatctatagtcaaaccaggctat
ctgtcaccaaaatttcttctatcctctggatcgttgatggagctaagcacagatcatact
cctagacatgaatctctttctgatgaagagttctttgatggttcctcaacggaaagtgca
ttgctcagtgaagattacagtcaggatctggacatctcaaccaacccggaggaatctcaa
gaggaagatgaaaacaatgcaacagtgcgatgtgtctgtggaatggatgaagaaaatggg
tttatgattcagtgtgaagagtgcctttgttggcagcacagcatctgtctgggtttattg
gaagacagcattccagaccagtatatctgctacctctgccaggatcctccaggtcagaga
tggaatgccaaatattgctatgaccaggagtggctaaaaaatggtcatatgtatggactg
tcctttctgaaggagaactactcccagcagaatgcaaagaaaatggtatcaactcatcaa
ctcctggctgatgtgtacagtgtgactgaagtgctccatgggcttcaactgaaaatcaat
attctgcagagtagaaagcaccctgatctacatctcttggtccagtcatgcaagaaatcc
actcaagagcaaactacaggagaaaagctcatggaatgtacagacagtattaagcaagct
gaaagcatctgtcataatcagagtcatagagaaagaccaagtcccagcaagagagtagag
ggaacctatatcactagcgaacacagctaccagaagcctcagggctgcaaccttgagcaa
aaccctacaacagaccaaaactgttcagaagatgaggacaccaataatttaaattataaa
gcggatcagaattctatattcaacggagttgaaaggcacactattcaggaaatgggcatc
ctgactggagaggggcctactggcactaaagagacagtgactgtttcaaatgatggtgac
tgcgatggaatggcaagagagggccatgtcaacccacagttcccatggcagctgaacctg
ctgacccagattgaggctgtgcagaacgaagtaaacagcagaatggatttcattgagaaa
gagctgaatgttctggaaagttggttggacttttctggggaacttgagccaccagaacca
cttgcacgactcccacagctgaaacgccacatcaaacaactcctgacagacttgggaaag
gtggagcaaatggcaacttgctgctctctctag
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