Rhincodon typus (whale shark): 109910588
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Entry
109910588 CDS
T06055
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109910588 (rnf6)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109910588 (rnf6)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109910588 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
MG280
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
109910588
NCBI-ProteinID:
XP_048453538
LinkDB
All DBs
Position
6:34232305..34268064
Genome browser
AA seq
705 aa
AA seq
DB search
MDLPNRASHRGDQQSPIENLNRSEDERSRQLERLSREEAYYQFINDLSEEDYRLMRDSNL
LGTPGEITAEELQQRLDGAKEQLTSQNAVGNYEPEQSQNQGSDTPGESSSSDSLLEWLNT
FRRSGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEHDAGNGQSLDTSSLENRD
RNVEDARLLSLLTPVASRTRSRTRAHMQVTNFESNFGGTVRVEELGATQVSPTQRSFRSA
TIDRTTGRLRPRRPSTNRQAVLSATVDRQIGRRTAGRHSVRRIQEDNQERQSDPAQLQSH
SVPTTVRESRARRHMEQRRSSRNFQNRRSRSPLHRTSVPVNFLDRSLSHQEDYLQPRQST
RRQRTMDQSTMTTEELQAVSSNPSLQSMGGGMIRQQIVDEGDVNHPSGSSVAVRRHPTIM
LDLQVRRIRPGESRDRDSIANRTRSRVRMAENTVTFESDSGGFRRTISRSELAGIRTYVS
TIRIPLRRISETGLGEPSSIALRSILRQIMTGFGELSSLMENDSDSELNQRVQQNQSERS
DSVSSQISPNSNLLNLNNQSTNILTGDRSESEQMNESMQNETLDNAAESQETRQSRDTNS
LVENGTLPILRLAHFFLLNDDDEDERQRGLTKEQIDNLLTRNYGNISVENEVSKTCSVCI
NDYAVGNKLRRLPCAHEFHIHCIDRWLSENSTCPICRQPILGSSN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcctaatcgtgccagtcatagaggagatcagcagtctcccatagaaaactta
aaccgcagtgaagatgagcgcagccgacaattggagcgcctgagtcgagaggaagcatac
taccagtttatcaatgacctgagtgaggaggactaccgacttatgagagacagcaacctt
cttggcactccaggtgaaattacagcagaagagctacaacagcgcttggatggtgcaaag
gagcaattaacatcacaaaatgctgtcggaaactatgaacctgaacaaagtcagaaccaa
ggctctgacacaccaggggaaagttccagtagcgattcccttcttgagtggctaaacaca
ttcaggcgttcaggaaatgccacccgcagtggacaaagtggaaaccagacatggagagct
gttagtcggacaaaccccaacagtggcgagtttcgcttcagcttggaaattaatattaat
catgagcatgatgccggcaacggtcagtctttggacacgtcttcactagaaaatagggac
agaaatgtagaagatgctcgactgctaagtttattgactcctgttgctagtcgtacaaga
agtcgcactcgagcccacatgcaagtgaccaattttgaaagtaattttggaggcacagtg
agagttgaagaacttggagccacgcaagttagtccaactcaaaggagtttcagaagtgca
actattgacagaaccacaggtaggctaaggcccaggagaccaagcactaaccgacaagct
gttttaagtgcaacagttgaccgacaaataggaagacgaacagcaggacggcatagtgtt
agaagaatacaggaagacaatcaggaacgtcaaagtgaccctgcacagttacaaagtcat
agtgttccaactactgtgagagagagtcgtgcacgacggcacatggaacaacgtagatct
tccaggaattttcaaaaccgacggagtcgttcacccttgcatagaacaagtgttcctgta
aattttttggataggtctttatcccaccaggaggattatttacaaccaagacaaagcacg
aggaggcaacggacaatggaccaatccaccatgacaactgaggaactgcaggctgtcagc
agcaatccttccttgcaatccatgggcggtggaatgattagacagcaaattgtagacgag
ggggatgtaaaccatcccagtggatcctctgtagctgttcgaaggcacccgactattatg
ttagatcttcaggttagacggatacgtcctggagaaagtagagatcgtgacagtattgct
aacagaactcgatctcgtgtccgaatggcagaaaatacagtgacctttgaaagtgacagt
ggtggtttccgccgtactatctcacggtctgaacttgcaggtattaggacttatgttagc
actatccgtatacctctacgcaggatatctgaaactgggcttggtgagccatcatccata
gccttgaggtcaatacttcgtcagattatgacaggattcggtgaactaagctctctaatg
gagaatgattccgattctgaacttaaccaaagagttcagcagaaccagtctgagaggtct
gattcagtaagctcgcagatcagtcctaacagcaatctcttgaatttaaataatcaatca
actaacatattaacaggagaccgatcagaaagtgagcaaatgaatgaaagcatgcagaat
gaaacccttgacaatgctgctgaaagccaagagacacgacaaagtcgagacacaaatagt
ttagtcgaaaatggtaccctgccaatcttgcggcttgcgcacttctttttgctgaatgat
gatgatgaagatgagcgccagaggggtttgaccaaagaacaaatagacaatctgttgacc
cggaattatggaaacattagtgtagaaaatgaagtcagcaaaacctgcagtgtatgtatt
aatgattatgcagttgggaacaagcttagaaggctgccttgcgcacatgaatttcatatt
cattgcatcgaccgttggctttctgagaactctacctgccctatttgtcgacagcctatt
ttgggctccagtaattga
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