KEGG   Rhincodon typus (whale shark): 109910589
Entry
109910589         CDS       T06055                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rtp03016]
    109910589 (dus3l)
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     109910589 (dus3l)
Transfer RNA biogenesis [BR:rtp03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    109910589 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 109910589
NCBI-ProteinID: XP_048469010
LinkDB
Position
2:complement(47348135..47387903)
AA seq 730 aa
MAETGDATNCVNESVNDPGVAAIKLQYRTSKDHFHEYINSGRDENLKLTDKDHLIDGKVT
EGAADYDLPEPKAKRIKLDENSENVNKESEKDNSGSCQKEEEHKQIIKKARGQNKNRPHM
KPKHYEHDQKLCTSVCQEPPKKCYFGEKCRFLHDLSKYLESKPSDLGDHCHLYDTYGRCQ
YGVTCRYAKSHTGPNNKNLINEDLMKTWEGTQIVKNSLSKDLQQTLRKKKFHFNKSEQYL
KQLNKGNTCENQSDAEKKTFAQTKCIEEKVIASNSTEIKLPVDISNRAIEEKDSSVGSQG
YIKAESPSVFYSENTLNNGQALESKQGNVEINEMSTFSRTGTDIAKSVKDDIEEVISTKT
LGVVTDEDIIKVRSCEKKRLNFRDKLYLAPLTTCGNLPFRRICKRFGADITCGEMAMCIK
LLQGQSSEWALLKRHYTEDLFGVQLEGAFPDTMTKCAELLNQNIDVDFVDINVGCPIDLV
YHKGGGCGLMNRLSKLEQIVKGMTSVLDVPLTAKLRTGVHEKVNIAHKIIPNLRDCGLSL
VTLHGRSREQRYTKLSDWDYIDHCAQLANPMPLFGNGDILSFEDANRAKATTSVSGIMIA
RGALIKPWIFTEIKEQRHWDISSRERFEILQDFRNYGLEHWGSDTQGVEKSRKFLLEWLS
FLCRYIPIGLLEHVPQKINERPPYYLGRDYLETLMASQNVSDWIKISEMLLGPVPPNFSF
LPKHKANSYK
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggctgaaactggagatgccaccaactgtgtcaatgagagtgtgaacgacccaggagta
gcagccatcaagcttcagtatcgtacttccaaagatcattttcatgaatacattaatagt
ggaagggatgaaaacctaaaacttactgacaaagatcatctaattgatggaaaagttact
gaaggtgctgcagactatgacctcccagagcccaaagcaaaaagaattaaactggatgaa
aacagtgaaaatgttaataaagaatctgaaaaggataatagtggatcatgtcagaaagaa
gaggaacacaaacaaattattaagaaagcaaggggccaaaataaaaacagacctcatatg
aagcccaaacactatgaacatgatcaaaagttgtgcacttcagtttgccaggaacctcca
aagaaatgttacttcggtgaaaagtgcagatttttgcatgatctgtcaaagtatctggaa
tccaaaccttctgatcttggtgaccattgccacttatatgacacatatgggagatgccaa
tatggtgttacttgccggtatgcaaaatctcacactgggccaaataacaagaacttgatt
aatgaagatcttatgaagacatgggaaggaacacagattgtgaagaatagtctaagtaaa
gatctgcagcagaccctacgcaaaaagaagttccactttaacaagtccgagcaatatttg
aaacaattgaacaaaggcaatacatgtgaaaatcaaagtgacgcagaaaagaaaactttt
gctcaaacaaaatgcattgaagagaaggttatagcaagtaattcaacagagataaagttg
cctgttgacatttcaaatagagccattgaggaaaaagattcttctgtcggatcacagggc
tatataaaggcagaatcaccgagtgtattttattcagaaaacacattgaataatggtcag
gcactggaatcaaaacaggggaatgttgaaataaatgagatgagtactttttctagaaca
ggtacagacatagccaaatctgtcaaagatgacattgaagaagtaatttccacaaaaact
ttgggagttgtgactgatgaagatattataaaagtacgatcctgtgagaagaaacgactg
aacttcagggataagctttatcttgctccactaacaacatgtggtaatctccctttccgt
cgaatatgtaaaagatttggagctgatatcacctgtggagagatggcaatgtgtataaaa
cttttgcaagggcaatcttcagaatgggcactgttgaaacggcattatacagaagacctc
tttggagtccagctagagggagcttttcctgacactatgacaaaatgtgccgagcttctg
aaccaaaacatagatgtagactttgttgatattaatgtgggctgcccaattgatctagta
tatcataagggaggtggatgtggtttaatgaatcgtttgagcaagttggaacagattgtg
aaaggaatgacttctgtgttggatgttcctctgactgcaaaattaaggacgggtgtacat
gaaaaagtgaacattgcccacaaaataatacctaaccttcgagattgtgggctttccctt
gttacactccatggcagatccagagagcagcgttacactaaattatcagactgggactac
attgatcactgtgctcaattggctaatccaatgccactctttggaaacggtgatatactg
tcatttgaagatgccaacagagctaaggcaacaactagtgtttctggaattatgattgca
agaggggcactgattaaaccttggatattcactgagataaaagaacaacgacactgggat
atttcctctcgagagagatttgaaattctgcaggattttagaaattatgggctagagcac
tggggatctgatacacagggagtagagaagagcagaaaattcctcctggagtggctatca
ttcttgtgcaggtatattccaataggtcttctagaacatgtacctcagaaaatcaatgaa
aggcctccttattatttaggtagagattatttggaaactctaatggctagccaaaatgta
tccgattggattaaaataagtgaaatgctgttgggaccagttcctcctaatttcagtttc
ctgcctaaacataaagcaaattcctacaagtga

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