Rhincodon typus (whale shark): 109910631
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Entry
109910631 CDS
T06055
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109910631 (sox3)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109910631 (sox3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109910631
NCBI-ProteinID:
XP_020365438
LinkDB
All DBs
Position
14:complement(4094893..4096245)
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AA seq
303 aa
AA seq
DB search
MYSMMETELKPAASQSNTGTLGSSAPGNNSKNPGANPDRVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLIK
KDKYSLPGGLLSPGAVPVNSSVGASPRMESYSHMNGWANGTYPLMQDQLAYSQHPGINSP
QIQQMHRYEMASLQYSPMMSSAQSYMNAASTYSMSPAYGQQNSLSSMVKTEPTTPPPLTS
HSRGACLGDLRDMISMYLPPGGDTGDPSAQSSRLHSVHQHYQNTAIPGTGLRQSTFLHGR
DSF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatggaaaccgagctgaagccggcagcttcccagtccaacacgggtaca
ctcggcagctccgctccggggaacaacagcaagaatccgggagcgaacccagaccgcgtg
aaaaggcccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggctcag
gaaaacccgaagatgcacaactctgagattagtaagagactcggagccgactggaaactt
ctgtctgattccgagaagcggccgttcattgacgaagccaagaggctccgggctttgcac
atgaaggaacacccggattacaaatacagaccgcggcggaaaaccaaaaccctcatcaaa
aaggacaaatactccctccccggcgggctgctctctccgggggcagtgcccgtgaatagc
agcgtgggagcaagcccgagaatggagagctactctcacatgaacggctgggccaacggg
acgtacccgctcatgcaggaccagttggcttattcccaacatccagggatcaacagcccc
cagatccagcagatgcaccgctacgagatggccagcctgcagtacagccccatgatgtcc
agcgcccagagctacatgaacgccgcctctacctacagcatgtccccggcttacgggcaa
cagaattcattgagctccatggtgaaaacagagccgaccacccctcccccgctcacgtcc
cactcccggggagcctgcctgggggatctccgggacatgattagtatgtatctccctcca
ggaggagatacaggagacccgtccgctcagagcagcagactgcacagtgttcaccaacac
tatcagaatacagctatacccggcacagggttgagacaatcaacgtttctacacgggcga
gactccttttag
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