Rhincodon typus (whale shark): 109910684
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Entry
109910684 CDS
T06055
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109910684
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109910684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox
Pyr_redox_2
DAO
Thi4
FAD_binding_3
HI0933_like
SWIRM
Lycopene_cycl
FAD_binding_2
Pyr_redox_3
FAD_oxidored
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
KARI_N
MurD-like_N
Shikimate_DH
NAD_binding_7
TrkA_N
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
109910684
NCBI-ProteinID:
XP_020365503
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All DBs
Position
2:119007079..119066349
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AA seq
557 aa
AA seq
DB search
MSPYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWHINCKE
VLTPQKCGNHIVVRGLVRIRCVLEVEKILYFVTRKGLVNTGVLAVNPDHPLLPNYYHKKH
VIVIGAGAAGLAAAQQLQNFGIKVMVLEARDRIGGRVWDDHSLGVTVGKGAQIVNGCINN
PIALMCEQLGSKMHKLGDRCDLIEEGGRVVDPTIDKCIDFHFNAMLDVVAEWRKDKKQFQ
DVPLGEKIEEIYQTFIQESGVQFSELEAKVLQFHLGNLEYACGSNLQQVSARSWDHNEFF
AQFAGDHTLFTSGYSAIINKLGDGLDIRLSTPVQTINYSGDDICIGTANGMLWTTQKVLI
TVPLALLQKNTIQFYPALSERKLKAINSLGQGVIEKIALQFPYKFWEKKIQGADFFGHIP
PSPNKRGLFGVFYDMDPQGEHCVLMSVISGDAVAVIQDMQEQQVAELCMSVLRELFKEEE
VPDPVRYFVTHWSKDPWAQMAYSFIKAGGSGEAYDIIAEDIQGKVFFAGEATNRHFPQTV
TGAYLSGVREASKIATL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttacttccaaccattctatcagcccaatgaatgtggaaaggccctttgtgtg
agaccagatgtgatggaactggatgagttgtatgagtttcctgaatattcccgggatcct
acaatgtacttggcgttgagaaatctaattttggctctttggcatattaattgcaaagag
gttcttaccccacaaaagtgtggaaaccatatagttgttcgagggcttgttcgtattcgc
tgtgtcctggaagtggagaagatcttgtattttgtgacaagaaagggcttggtcaacact
ggggtcttggctgttaacccagatcatcccctcctacccaattattatcacaagaaacat
gttattgtaattggtgctggtgcagcaggcttagcagctgcacaacaactgcaaaatttt
ggaattaaggtaatggtgctggaagccagagaccggattggtggacgtgtttgggatgac
cactctcttggtgtgactgtgggaaaaggagcacaaattgttaacggctgcataaacaac
cctatagcactaatgtgtgagcaacttggaagtaagatgcacaaattgggggataggtgt
gatctaattgaagaaggtggaagggtcgttgatcccaccatagacaaatgcattgacttc
catttcaatgccatgttggatgtcgtagcagaatggagaaaagacaagaaacaattccaa
gatgtgcctcttggagaaaagattgaggagatctaccaaacttttattcaagaatctgga
gtccagttcagtgaactagaagccaaagtgctgcagtttcatcttggtaatcttgaatat
gcttgtggtagcaacctacagcaggtgtctgctcgttcctgggaccacaatgagtttttt
gcccagtttgcaggtgatcatacactcttcacatcaggttactctgccatcatcaataaa
cttggcgatggtctggacatacgacttagtactccagtacagaccattaactactcagga
gatgatatttgcattggaacagctaatggaatgttatggacaactcagaaggtcttgatt
actgttcctctagctcttcttcagaaaaacactattcagttttatccagctctatctgaa
cggaaactcaaggctatcaacagtctaggtcaaggggtaattgaaaagattgccctccaa
tttccatataaattttgggagaaaaaaattcaaggagcagacttctttggccatattcct
cccagtcctaacaaacgaggactttttggagtattctatgatatggatccacaaggtgag
cattgcgttctgatgtctgtgatcagtggagatgcagtggctgtcattcaggatatgcaa
gaacagcaagtggcagaattatgtatgagtgtcctccgagaactttttaaagaagaggaa
gttccagatccagtcagatattttgttacacactggagcaaggacccatgggcacagatg
gcttacagctttataaaggcagggggaagtggtgaggcttatgatataatcgctgaagat
atacaaggaaaagtgttttttgctggggaggcaactaatcgacacttcccgcaaactgtt
actggggcctacctgagtggagtcagagaagcaagtaaaattgctacattgtaa
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