Rhincodon typus (whale shark): 109910695
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Entry
109910695 CDS
T06055
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109910695 (ddx21)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109910695 (ddx21)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109910695 (ddx21)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
Helicases
109910695 (ddx21)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109910695 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
109910695
NCBI-ProteinID:
XP_048464646
LinkDB
All DBs
Position
20:368274..408184
Genome browser
AA seq
697 aa
AA seq
DB search
MPARLSLQSEDPEPTMEAESVSRKSHKKSKKEKRKHSERSEDKKARSWENGELNEDSTGE
SELKPPKAKRHRSEDNEGRDDRKGHRTEKNGVIKESKQKTAPRSSDDSSQYSEGEIEEEL
TPEQKEGAFSNFRISQETIELLKERGVTYLFPIQARTFNYIYDGNDCVAQARTGTGKTFS
FAIPLVEKLQSEAVDRRRNRPPKVLVLAPTRELAIQVAKDFKDVTKKLVVSCFYGGTAYV
GQMDSIRNGIDILVGTPGRIRDHLQNMKIDLSKLKHVVLDEVDQMLDMGFAEQVEDILKV
AYKKDSKDNPQTLLFSATCPPWVYQVAKKYMRAQYKQVDLIGKRTQRAATTVEHLAIECH
WTQRAAVIGDVIQVYSGSHGRTIIFCETKKEVNELVMNNSIKQDAQCLHGDIPQKQREIT
LKGFRDGSFEVLVATNVAARGLDIPEVDLVIQGCPPKDVDSYIHRSGRTGRAGRTGICIC
FYQRKEEDDLRFVEHQAGVTFKRVGVPTAADIVEASCKDAVRSLDSIPAAAIERFRPAAE
SLIEQRGALQALAAALAHISGARSIEQRSLLNSDAGYTTMVLACSTEIHSLNYAWRGLKE
QLGETVESKVKRMRFLKGKMGVCFDIPEDSLETLKGSWQDNRRWQLTVATKLPELEEERR
DGGSKYRKRSFNRGGGGFNKSQNGRSMKRNFSRAFDW
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcgactcagccttcagtccgaggacccggagcccacgatggaagccgagtcc
gtcagcaggaaatcacataagaaaagcaagaaagagaagaggaaacactcggagagaagc
gaggacaaaaaggccaggtcctgggagaatggcgagttgaacgaagactcgacaggagaa
agcgaactaaagcccccgaaagcaaagagacaccggagtgaagataatgagggcagggat
gacaggaagggtcatagaaccgagaaaaacggggtgatcaaagagtccaagcagaaaacg
gccccacgttccagcgatgattctagtcaatattcggagggtgagatcgaggaggaactg
actccagaacagaaagaaggggccttttcaaacttcaggatttctcaagaaacaattgaa
ctgctgaaggaacgaggagtgacctacttgtttccaatacaagcacgaacattcaactac
atctacgacgggaatgactgcgtggcacaggccaggactggtactggcaaaaccttctcc
ttcgcaatccctttggtggaaaagctgcagtcagaggctgttgatcggaggagaaatcgc
cctccgaaggtcctagtgcttgctccaacaagggagctggcgattcaagtagcaaaagat
ttcaaggatgtaaccaagaagctcgtggtctcttgtttttatggcggaacagcatatgtt
ggacaaatggacagcattcggaatggtattgatatcctggtggggacacctgggaggatc
agggaccatttacagaacatgaaaatcgacctgtctaaactgaagcatgtggtcctggat
gaagtggaccagatgttggacatgggctttgctgagcaggtggaggatatcctgaaagtt
gcttacaaaaaagattccaaagacaatcctcaaacactcctcttctctgcaacttgccct
ccctgggtttatcaagtcgctaagaaatacatgagagcacagtacaaacaggttgatctc
attggaaaacggactcagagagctgctacaactgttgagcatttggccatagaatgtcac
tggacacagcgagcagcagtcattggtgatgtcatccaggtttacagtggcagtcatggg
cggactattatcttctgtgaaacgaagaaggaagtaaatgaactggtgatgaacaactca
ataaaacaggatgctcagtgtcttcatggggacattccacaaaaacagagagagatcacc
ttgaagggtttccgggatggctcctttgaggtcctggttgccaccaacgtggctgcccgt
ggcttggacattccagaagtagatctggtaatacagggctgcccaccaaaggatgtggat
tcctacattcaccgttctggtcgtacaggcagagctgggcgcacagggatctgcatctgt
ttttatcagcggaaggaggaggatgatctgagatttgtggaacaccaagctggggtgaca
ttcaaacgtgttggagttccaacggctgcagacattgttgaagcttcctgcaaggacgcc
gtccggtctttggactccatcccagcagcagccattgagcgtttccgtccagcagctgaa
agcctgattgagcagcgaggggcattgcaggctttggctgctgctttggcacacatctca
ggcgcaaggagcatcgagcaacgttctctcctgaactcggatgcggggtatacaacaatg
gtgttggcttgttcaacagaaattcatagtttgaactacgcatggagagggctgaaggaa
caactcggagagactgtggaaagcaaagtgaaaaggatgcgattcctaaagggtaaaatg
ggtgtctgtttcgatattcctgaagactctctggaaaccttgaagggaagctggcaggac
aatcggcgctggcagctcaccgtagcgactaagttaccagagctggaggaggaaagacgg
gatggagggtccaaatacagaaagcgttccttcaacagaggaggaggaggattcaacaag
agtcagaatggcagaagcatgaagagaaatttcagccgagccttcgactggtag
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