Rhincodon typus (whale shark): 109910721
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Entry
109910721 CDS
T06055
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03020
RNA polymerase
rtp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109910721 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109910721 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109910721 (polr3b)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109910721 (polr3b)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109910721 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
NAD_binding_1
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_5
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
109910721
NCBI-ProteinID:
XP_048463895
LinkDB
All DBs
Position
18:complement(45052065..45119896)
Genome browser
AA seq
1079 aa
AA seq
DB search
METLAAEFGDLDPERLAAPVREVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGVPDVEESFNVTRPVAPHESQKVQHFTSNLRPPSLLSM
VPDAPSRQFAIRPDKKSEAKIQMVKQVGMIAGGTGITPMLQLIRAIVKDPEDLSICHLLF
ANQTEKDILLQSELEEIEAEHPHRVIIWYTLDRAPEGWKYSEGFVNEQMIKEHLPPFADD
VLILLCGPPPMIQFACNPNLDKLGYSPSSRVCAVAGPCCRCDTDMHSAHSNMSIHLTDDS
RQAAGFVTALNSKLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNG
MVNAISTGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPRSLQPS
QWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYP
NVFIVFLNGNILGVIHDHQKLVKTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCR
PYIIVKNRQPAVTNKHIEELSQGYRSFEDFLHEGLVEYLDVNEENDCYIALYEHMINKST
THLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAY
PQKPMVKTKSIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKN
AKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENRQVLVNKSMPT
VTQTPLEGTAQSQQPQFRDVPITYKGATDSYIEKVMISSNSEDAFLIKILLRQTRRPEIG
DKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGLL
DGRFHYGTAFGGSKVKDVCEDLIHYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKH
MVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMMLLERLMISSDA
FEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLARYNE
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctagcggcggagttcggggatttggatccggaaaggctggcggcaccggtc
cgggaggtggaggaaaaatggaagcttcttcctgcttttctgaaggtcaaaggcctggtg
aagcagcacattgactcgttcaactacttcataaatgtcgagattaagaagattatgaaa
gccaacgagaaggtgaccagtgatgctgatcctatgtggtatttaaaatacctgaatatt
tatgttggagtgccagatgttgaagaaagtttcaacgtaaccagacctgttgctccacat
gagtcacagaaggtgcagcattttacgtccaatttacgtcctccctccttgctatccatg
gttccagatgcaccttccagacagtttgccattcgtcctgataagaaatctgaggccaag
attcaaatggttaaacaagtgggaatgattgcaggtggaactggtataactcccatgctg
caactgatcagggcgatcgtgaaggatccagaggatctctcaatctgccacctgctgttt
gccaaccagactgagaaagacatcctgttgcaatcggagttggaagaaattgaggctgag
caccctcaccgtgtcataatatggtacaccctggacagagctcctgaaggctggaaatac
agtgagggatttgtgaatgaacagatgatcaaggaacaccttcccccatttgccgacgat
gtgcttattctgctgtgtggtcctccgccgatgatacagtttgcatgcaatccaaacctt
gacaaactgggttatagtccaagctctcgggtgtgtgcggttgctggcccatgctgcagg
tgtgacactgacatgcactctgcacacagtaacatgtccatccacttgactgatgacagc
cgacaagctgctggctttgtgactgcactaaacagcaagcttctgtctctgctttttgaa
gatttgttcaaaaagttcaattcagagctgaagaagattgctgaccagatcatccccaag
caacgagcggcccagtttgatgttgtgaagcacatgcggcaagatcagatcactaatggc
atggtcaatgccatctcaactgggaattggtctctcaaaagattcaaaatggaccgtcag
ggtgttactcaggtgctgtctcgtttgtcttatattgctgccctgggtatgatgaccagg
atctcctctcagtttgaaaagaccagaaaagtgagtgggcccagatcgcttcagccgtca
caatgggggatgttgtgcccatcagacactcctgaaggagaggcttgcggtttggtgaag
aatctggctttgatgacccacatcacaacagatatggaagatggccccataattaaactc
gcctttaaccttggtgttgaagatgtaaatctgctttgtggggaagaactgtcatatcca
aatgtgttcattgtatttctaaatggtaacatcttgggtgtaatacacgatcatcagaaa
ctggtgaaaacattccgtttgatgcgccgagcaggatacatcaatgaatttgtttctatc
tctacaaatctgacagatcgctgtgtttatatttcttccgatggaggcagactttgcagg
ccctacattattgtgaagaacagacaaccagcagtcacaaataagcatattgaagaacta
tctcagggttacaggtcctttgaagacttcctacacgaaggattagtggaataccttgat
gttaacgaagaaaatgattgctatattgcactttatgagcatatgatcaacaaatctacg
acccacttggagattgaaccatttacacttcttggtgtatgtgcagggctcattccctac
cctcaccacaatcagtctccaaggaacacctaccagtgtgccatggggaagcaagccatg
ggtacaataggctacaaccagcggaatcggattgacaccctcatgtacctgcttgcctac
cctcagaaacctatggtgaaaaccaaatccattgagctgattgactttgaaaagctccca
gcaggacagaatgctacagtagctgtgatgagctacagtggttatgatattgaagatgcg
ctcgtcctaaataaggcttctttggacagaggctttggaagatgtctggtgtataaaaat
gctaaatgtacacttaaacgttatacaaatcagactttcgataaagtcatgggtccaatg
cttgacgcagctacacggaagccaatttggcggcatgaaattttagatgcggatggtatt
tgctcaccaggtgagaaagtggaaaacagacaggtgctggtgaacaaatcaatgccgaca
gttacacagactccgttagagggaactgcacaatcccaacagccacagtttcgcgatgtc
ccaatcacctacaaaggagcaacagattcgtatattgagaaggtgatgatctcttcaaac
tcagaagacgcatttttaattaaaattctgctgagacagacgagacgtcctgagattggt
gacaaattcagcagccgacatggccagaaaggtgtttgtggtttgattgtacctcaggaa
gacatgccattctgtgacagtggaatatgtccagatatcatcatgaatcctcacggttac
ccctcccgaatgacagttggtaagttgattgaactgttggcagggaaggctggcctcctg
gatggcaggttccactatggcactgcctttggtggaagcaaagtaaaggatgtttgtgag
gatcttatacattatggttacaattatcttggcaaggactatgtaacctctggaatcact
ggtgaaccattggaagcatacatctactttggtcctgtgtactatcagaagctgaagcac
atggtcctggataagatgcatgcacgagcacgaggcccccgggctgtcctcaccaggcaa
ccaactgaaggacgatcgcgtgatggaggtttgcgtcttggtgagatggagcgagattgc
ctgattggctatggagccagcatgatgctgttggagaggctaatgatctccagtgatgct
tttgaggtggacgtctgtggacaatgtggtctgctgggatactctggctggtgtcattac
tgcaagtcatcatgtcatgtctcctctttgcggatcccgtatgcctgtaaactactattt
caggaactgcagtccatgaacattgtgcccagattgaagctggccaggtacaacgaatga
DBGET
integrated database retrieval system
