Rhincodon typus (whale shark): 109910868
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Entry
109910868 CDS
T06055
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase Rpusd3
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109910868
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109910868
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
109910868
NCBI-ProteinID:
XP_020365710
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Position
16:complement(16220750..16239107)
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AA seq
377 aa
AA seq
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MNRVWKQIWTRVSALTSVMRGRPCFFIQRLLTDSASHVSSMVSCSDIWLKRQKQKHRQHL
KKDKVVSILQDPGVPVLEKLTREDLLEMLATSVVYQENPLIGINKPSGLPITGKELSFTS
LLPELQQRLHLSKELHIVKASNRDCSGLVLLSTCHQTTKYIEDAFVQARRRKEALTSYCA
VTVGIPEPAEGGINVALKKQNIGEHELVVPIFHPTPGNFQRKEAKKAVTMYKVLTAVDGC
ALVELHPLSTFESLLQVHLTVKLSAVLGDHVYSSRLGKVLGIPFCLPAESAIPRIQVLDE
SLLQKLRFDQKQMWKMPLHLHLHKLSIPPFEMKKSATVIVATPPAYFLRTLDLLGLRVNE
FPEADVRKRRNEEMCSI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgtatggaaacaaatatggacacgagtttcggctctgacatcagtcatgcgt
ggacgcccctgttttttcatacaaagacttctgactgactcagcatctcatgtctccagt
atggtatcctgctctgacatctggctcaagaggcaaaaacagaaacataggcagcatttg
aaaaaagacaaagttgttagtatccttcaagatccaggtgtcccagtgcttgaaaagctg
accagagaagaccttctggaaatgctagctaccagtgtggtataccaggaaaatcctttg
attggtatcaataaaccatcaggacttcccatcacaggtaaagaactctcctttacctcg
ctgcttccagaacttcagcagcgattgcatctttcaaaagaactccacattgtaaaagca
agtaacagggactgttctggcctggttctgctttccacctgtcaccaaaccaccaaatac
attgaggatgccttcgtccaagctcggagaaggaaggaagcactcaccagttattgtgca
gtgacagtgggcatcccagaacctgcagagggaggaatcaatgttgctctgaaaaagcag
aacattggcgagcatgagctggtagttccaatttttcatcccacgcctggaaactttcag
cggaaggaagcaaagaaggctgtaacaatgtacaaggttctcactgctgtagatggctgt
gcattagtagagcttcatcctctctcaacctttgaaagcctcctacaggtccacctcact
gtcaaactgtctgcagttcttggggatcatgtgtattcttcccggctcggcaaggttctg
ggaattcccttctgtctcccagcggaatcagcaattcctcgaattcaggtcttggatgaa
tccttgctgcagaagctgcgttttgaccagaaacagatgtggaaaatgcctcttcacctt
cacttgcacaaactttcaattccaccatttgaaatgaagaaatcagcaacagtgattgtg
gctactcctccagcttacttccttaggactcttgacctcttaggcttaagagttaatgag
tttcctgaagcagatgtaaggaagaggagaaatgaagaaatgtgttccatatag
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