Rhincodon typus (whale shark): 109910887
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Entry
109910887 CDS
T06055
Name
(RefSeq) Down syndrome cell adhesion molecule-like
KO
K06767
Down syndrome cell adhesion molecule
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109910887
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
Other
109910887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Sp38
C2-set_3
V-set_CD47
Interfer-bind
Pur_ac_phosph_N
ChitinaseA_N
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
109910887
NCBI-ProteinID:
XP_048458991
LinkDB
All DBs
Position
11:15079406..15569996
Genome browser
AA seq
1875 aa
AA seq
DB search
MVLWLLEEEFRPYQDPISFPIAFGIPIHWIQLPEMPQALPNVASEDLQSSLYFVNGSLQE
VVFASTMGTLLPCPASGNPPTTLRWYLATGEEMYDVPGIRHVHPNGTLQIFPFPPSSFNN
LIHDNSYYCTAENPSGKIRSQDIHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVET
YITVVSWEKDTVSLVSGSRFHITPTGALYILDVQNEDGLYNYRCITRHRYTGETRQSNSA
RLFVSDPANSAPTILDGFDHRLVMADQRVELPCKASGHPAPKYRWVKDNAPLARDNRFRQ
TVTGLLIVKAVPADTGRYTCEVWNSFGNAEIIGRLNVKQQLKATVNLHKVKTSIGGKLLL
SCTVTGVEEYEVEWYQNGEIITPGNNVRITGNNHEKLMIDGLAKSDGGAYQCFVRKGRMS
AQDLVHVILEDGTPKVISFFSEKVVSPNEPISLMCSVKGNPPPTITWTLDDDSIARDGSH
HFSQYSTTEGNMVSHLNVTNTQVRDGGVYRCVANNSAGVAMYQARINVRGPASIRSMKNI
TAIAGRDTYIHCRVIGYPYYSIKWYKNSKLLPFNHRQVAYGNNGTLKLSDVQKDVDEGEY
ICTVLVQPQLTTSQSVYVAVKVPPFIQPFEFPRFSIGQRVFIPCVVISGDLPIRITWQKD
GRPIPASLGVTIDKIDFTSSLRISNLSLMHNGNYTCIASNDAAAVEHQSQLIVRVPPRFV
VQPADQDGIYGKSVILNCSAEGYPVPTIVWKYSKGAGVPQFQSIALNGRIQLLVNGSLLI
KHVLEEDSGYYLCQVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEVSCTAHG
EKPIIVRWEKEDTIIDPERMFRYVVSTKEIGDEVISTLQITPTVRGDSGFFSCHAINSYG
EDRGLIQLTVQEPPDPPEIEIREVRARSIALRWSMGFDGNSPITGFDIECKNKSDSWDAV
QRTKDVSPQLNQATIIDLHASSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPVDVV
LESLSSQCIRVTWKAPKKHLQNGLIRGYQIGYREYSTGGNYQFNIISMETTGDSELYTLD
NLKKFTQYGVVVQACNRAGTGPSSQEIIATTLEDVPSRPPDNVQASAVSPEVISLSWSMP
PKEALNGILQGYRVIYWANLPDGELGEIRNVTTTQVTLELDGLEKFTNYSIQVLAFTRAG
DGVRSEQIFTRTKEDVPGPPGGVKAAAASATIVVVSWLAPLKMNGIIWKYTIFCSHPYPT
IISEFEASPDSFYYRIPNLSQNRHYSIWVVAITAAGRGNSSEIITVEPLAKAPARILTFS
GTVTTPWMRDIVLPCKAVGDPAPTIKWMKNSNGTPSPVVTDGRRSIFNNGSFVIRTVKAE
DSGYYSCVTSNNWGSDEILLNLQVQEPQFAKEQDLFSSVNTTRIRLNLLGWIDGGCPITM
FTLEYRPFGTTVWTTAQRTTLSKSYILYDLQEATWYELQMKVCNSAGCTEKQTEFATLNN
DGSTIPPLIKSVVQTEEGMATNEELKMLVTISCILLAALLLFALLLIVRRRRREQRLKRL
RDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTD
SDFGEAVKQKSLTATHTVHYHSVSQATGPLVDVSDARPGTNRARSSMVSTESASSTYEEL
ARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTAS
PPKPQDAGRVANMAVPKAHRPAGDLMHLPPYLRVDFLIHRGVAGPSRDLGQGHACLEPQR
RNTMKRTQVMEPIPVEVATRDTQQWQSSTASTLPQREGADRGKAAKLSSSQESLLDNRGH
LKQGNNPYAKSYTLV
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggttctctggctcctggaagaagagttcaggccatatcaggacccaatttctttcccc
atcgcatttgggattcccattcactggatacaattaccagaaatgccacaggctcttccc
aatgttgccagtgaagatctgcaatccagcttgtactttgtcaatggatctctgcaagag
gtagtcttcgccagtaccatggggacattgttaccatgccctgcatcagggaatccccca
acaaccctgcgttggtacctagcaactggggaagagatgtacgacgtcccagggatccga
cacgtccatccaaatggcactctccagatcttccctttccctccttcgagttttaataac
ttgatccatgacaattcgtactattgcacagcagaaaatccttcagggaaaattagaagt
caggatattcacattaaggctgttttaagagagccctatacagtccgcgtagaggaccag
aaagccatgcgggggaatgtagcagtcttcaagtgcattatcccctcctctgtggagact
tatatcactgtagtgtcatgggagaaagacacggtctcacttgtctcaggatctagattc
cacatcacacctacaggagccttgtatatattagacgtacagaacgaggatggcctgtac
aattatcgctgcatcacacggcacagatacactggtgaaacaagacagagcaacagcgcc
cggttatttgtgtcagatcctgctaactcagctccgacaatcctggatggatttgatcat
cggctggtcatggctgaccagcgggtcgagttgccttgcaaagcctctgggcatcctgca
ccaaaataccgctgggtgaaggacaatgcccccttggcacgggacaacaggttcaggcaa
actgtcactgggctactcattgtgaaggcagtgccagcagacacaggaaggtacacctgc
gaggtgtggaacagctttgggaatgcagagattattggccgcctgaatgtaaaacagcaa
ctgaaggcaacagtgaatctgcataaggtgaaaaccagcatcggtggcaagttattgctg
tcctgtacagtaaccggagtggaggagtatgaggtggagtggtatcagaacggtgagatt
atcacccctggcaacaacgtgagaatcaccggaaacaaccacgagaagctgatgatagat
ggactggcaaagagtgatggaggagcctatcagtgctttgtaaggaaaggtcgaatgtca
gcccaggatttggtgcatgttatccttgaagacggaacgccgaaggtgatttcgtttttt
agtgagaaggtcgtgagtcccaacgagcccatctcactgatgtgcagtgtgaaaggcaat
ccaccaccaaccattacctggaccctggacgatgactcaatcgcacgagatgggagccat
cacttcagccagtacagcaccactgagggtaatatggtcagccacctcaatgtcaccaac
actcaggtccgggatggaggagtctaccggtgtgtggccaacaactctgctggagtcgcc
atgtatcaggctcgaataaacgtaagaggacctgccagtatacggtcaatgaaaaatatc
acggccatagctggtcgtgatacctatattcattgtcgggtgattggctacccatactat
tcgatcaagtggtacaagaattccaagctgctgccctttaaccatcgccaggtggcatac
gggaataacgggaccttaaagctctccgatgtacagaaagatgtggacgagggagagtac
atctgcactgtgcttgtgcaacctcaactgacaaccagtcagagtgtgtatgtagctgtc
aaagtcccacctttcatccagccttttgaatttccaagattctccattgggcagcgtgtc
ttcatcccctgtgtagtcatctcaggggacctgccaatcagaatcacttggcagaaagat
ggtcgtccaatccctgcaagcctgggagtcaccattgacaaaattgacttcaccagctca
ttgaggatctccaacctctccctgatgcacaatgggaactacacatgcatcgccagcaac
gatgcagcagcagtggagcaccagagccagctgattgtccgagttcctcctcgatttgtg
gtgcaacccgctgaccaggatggtatttatgggaaatctgtcatactgaactgttctgcg
gaaggttatcctgtcccaacaatcgtatggaagtactccaaaggtgcaggtgtcccacag
tttcagtcaattgccctgaatggtcgcatccaactactggtgaatgggtctctcctaatt
aaacatgtgctcgaggaagacagtgggtattacctctgccaggtcagcaacgatgtggga
gctgatgtcagcaagtccatgtatctgacagtcaaaattcctgccatgattacatcatac
ccaaacaccactctggcaactcagggacagaagaaagaggtcagctgcactgcacatgga
gagaagcccatcattgtccgctgggagaaagaagacaccatcatcgacccagaacgtatg
ttccgttacgttgtatccaccaaagagattggagatgaggtcatttctacattgcagatt
acaccaacagtccggggagattctgggtttttctcctgccatgctattaattcatacgga
gaggaccgagggttgattcagctcacggtgcaagaacccccagatcctcctgaaattgag
atccgtgaggtgagagcacggagcatcgctttgaggtggagcatgggttttgatgggaac
agtcccatcactggctttgacattgagtgcaagaacaagtcagattcgtgggatgcagta
caaaggacgaaagatgtctcgcctcagttgaaccaggccacaattatcgacctgcacgcc
tcttccacctacaacatccgtatgtatgccaaaaaccgcattgggaagagtgaggccagc
aatgagcttaccatcaccacagatgaagcagcccctgacggtccacctgtcgacgttgtg
ctggaatccctatcctctcagtgtatcagagtgacttggaaggctccaaagaagcacttg
caaaatggattaatccgcggctatcaaattggttatcgggagtacagcactggtggcaac
taccagtttaatatcatcagcatggaaacaaccggcgacagcgagctgtacacactggac
aatctgaaaaagttcacgcagtatggagtggtggtgcaggcttgtaaccgtgcgggcact
ggaccctcctcacaggaaatcattgcaacaacgttggaggatgtgcccagccgaccacca
gacaacgtccaagccagtgcagtatctccggaggtcatttcactgtcttggtcgatgcca
ccaaaggaggcactgaatgggattctacaaggatatagagttatttactgggcaaacctc
ccagatggagagctcggagagattagaaacgtcacaaccacccaggttacgctggagcta
gatggactcgagaagttcaccaactacagtatacaggtgctggcattcacccgggcagga
gatggagtcaggagcgagcagatcttcacacgtaccaaggaggatgttccaggtcccccg
ggcggagtgaaagcagctgcagcctctgccacaattgtggtcgtctcctggcttgccccg
ctgaagatgaatggcatcatttggaagtacaccatattttgctctcacccatatccaaca
ataatcagtgaatttgaagcctcaccggactcgttttattaccgcattcccaacctcagc
caaaatcgccattatagcatctgggttgttgcaattactgcagcaggaagagggaactcc
agtgagattattacagtggagccactggcaaaagcaccagcccggatcctgacattcagc
ggcaccgtgacaacaccatggatgcgagacatcgtattgccgtgtaaagcagttggggac
ccggcccctacaatcaaatggatgaagaacagtaatggaacaccgagccctgtggtcacc
gatggacggagaagcatctttaacaatggaagctttgtcatccgcactgtgaaagcagag
gattctgggtactatagctgcgtgacaagtaataactggggatcagatgaaattcttctt
aacctacaggtgcaagagccacagtttgccaaggaacaggacctgttctccagtgtcaac
accacaaggatcaggctgaatcttcttggttggattgatggtggctgtccaatcaccatg
ttcacccttgaatatcggccatttgggacaacagtctggacgacagcacagcggacgacc
ctgtccaagtcatacatcctgtacgacttgcaggaggccacgtggtatgaactgcaaatg
aaggtgtgcaacagtgcaggatgcacagagaagcagacagaatttgcaaccctcaataac
gatgggagtacaatcccaccgctgattaaatcggtggtccagaccgaggaaggaatggca
actaatgaggaactgaaaatgctggtgaccatctcgtgcattctgctggctgccctgctg
ctgtttgctctgcttctgattgttcgaagacgacggagggaacagcgtctgaaaagactg
agggatgccaaaagtttggccgagatgctgatgagtaaaaacacaaggacatctgatacc
ctgaataaacagcagcagacactgagaatgcacatcgatatccctcgtgcacagcttctg
atagaagagagggataccatggaaacaatagatgaccgatctactgtgctactgacggat
tcagactttggagaggctgtgaaacagaagtcgctaacagccacacacactgtccattac
cattcagtctcgcaggccactgggcctcttgtggatgtttcagatgctcgacctggaacc
aacagagcacggagcagcatggtctcaacggagagtgcctcctctacgtatgaggagctg
gcacgtgcatacgaacatgccaagatggaggagcagctgaggcacgccaagtttacaatt
acggaatgcttcatatcggatacatcttcggagcagctgacagctgggaccaatgagtac
acagatagcctgacatccagcacgccttcagaatcgggcatctgcaggtttactgcatca
ccgccgaaacctcaggatgcagggagggtggcaaacatggcagtgcccaaagcacatcga
ccagctggtgaccttatgcatcttccgccatacctaagggtggacttcctgattcacaga
ggagtggcaggtccgagcagagaccttggtcagggtcatgcctgtctggagccacagaga
aggaacaccatgaaacgcacacaagtcatggagccaatcccagtggaagtagctaccagg
gacacacagcaatggcaatcaagcaccgcgtcgacattacctcagagggagggagcagac
cgtggcaaagctgccaaattgagcagctcccaagaatcgctactggacaatcgcggtcac
ttgaaacaagggaacaacccttacgcaaaatcctacaccctggtataa
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