Rhincodon typus (whale shark): 109910908
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Entry
109910908 CDS
T06055
Name
(RefSeq) proto-oncogene vav
KO
K05730
guanine nucleotide exchange factor VAV
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04510
Focal adhesion
rtp04517
IgSF CAM signaling
rtp04519
Cadherin signaling
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109910908
04519 Cadherin signaling
109910908
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109910908
09142 Cell motility
04810 Regulation of actin cytoskeleton
109910908
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Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CH
C1_2
LZ3wCH
CAMSAP_CH
zf-RING-like
PH_10
Filamin
SH2_1
CDC24
DUF7145
PH_5
Motif
Other DBs
NCBI-GeneID:
109910908
NCBI-ProteinID:
XP_048473757
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Position
38:4355597..4445786
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AA seq
874 aa
AA seq
DB search
MEKINYEGELTSNNRIDGKEEESAQGNEIGEIMMGSQKLVDELNQYFALIFMEEDTVGIP
EILNKQATKGKEEIREVPGKLKGLKADKLPTPDGIHFWFLCLKNIRTFLNACCEKFNMKK
SELFEAFDLFDVRDFAKVIDTLSYLSYTPIAQRKGICSFPTEDSLADDDIYSGLSDVIDD
TGEEDDDLYDCVENDDDEGGEIYEDLMRPECVMAAPQKMTDFDKRNCCLQEIRQTEEKYT
ETLESIHQHFFRPLHRFLNTYDLENIFLNIEELLNVHRSLLEEIQISIKMNNAQNLYEIF
NSYKKRLLLYGRYCSQVEAATKHLDKIASIREDVQMKLQECSNRANNGRFTLRDLLMVPM
QRVLKYHLLLQELVKHTTDKTEQGNLRTALDSMRDLAQCVNEVKRDSETLKQITSFQLSI
ENLNQSLAGYGRPKIDGELRLMTVDKRSKQDRYVFLFDKAVIICKRKGENYEMKEVIDLQ
YYQIRDDPMGSKETKKWSHMFLIIEAHGQHGFEFFFKTRELKKKWLEQFEMALSNIFPEN
GSSNNHDFQMHSFEESATCKACQMLLRGTFFQGYRCSKCKSAAHKECLGRVSPCGRQDSG
SSTLTKSKSNRIAPSRAAKTGLPKTEVCQEYFGMPPPPVAFGPALKLLLGDIIELTKAEV
EQQWWEGRNTSTNEIGWFPCTKVKPFVCAPQIDYSSFSWYAGPMERSQAETLLNTRSDGT
YLVRQRVKDAGEYAISIKFNSEVKHIKVTTADGLFRVTDKKAFKSLLELVEFYQQNSLKE
CFKTMDTALQHPFKEPEKRTIPKFSGTSLKCFGTAKARYDFSARDRSELSLKEGDVIKII
NKKGSPGWWKGEVYGRVGFFPANYVEEDYSDYCY
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataaattatgagggcgaactaacgagtaacaacagaattgatggtaaagag
gaagagagtgcccaagggaatgagattggggaaataatgatggggagccagaaattggta
gatgaattgaatcaatactttgcattaatcttcatggaagaagacactgttggcattcca
gaaatactaaataaacaagcgacaaaagggaaagaggaaataagagaagtgccagggaaa
ttaaaggggctaaaggctgataagttgcccacaccagatgggatccatttttggttcctt
tgcctgaagaatatccggacctttctaaatgcgtgctgtgagaaattcaacatgaagaag
agcgaactgttcgaagcctttgatctattcgacgtgcgcgattttgccaaggtcatcgac
actctgtcctatttatcatacactcccatagctcaaaggaaaggaatctgctcctttcca
acagaagacagcttggccgatgatgatatctacagtggtctttctgatgtcattgatgac
actggagaagaagatgatgacctttatgattgtgtggaaaatgatgatgatgaaggaggt
gaaatttacgaagatctgatgaggcctgagtgtgtgatggccgcgcctcagaaaatgact
gactttgacaaacgcaattgctgccttcaagagatcagacagacagaggagaaatacaca
gaaacattagagtccatacatcagcatttttttaggcctctacatcggtttctcaataca
tacgacttagagaacatattcctgaacatcgaggaactattaaatgtgcatagaagttta
ttggaggaaatccaaatctcgattaaaatgaacaatgcccagaacctctatgaaatcttc
aacagttacaagaaaaggttgttgctgtatggacgatactgtagccaggtagaggcagct
accaaacacctggacaagatcgcgagcataagggaagatgttcagatgaagctgcaggaa
tgttccaacagagcgaacaacggacgattcaccctacgagatctcttgatggtacccatg
caaagagtcctcaagtatcaccttctgcttcaggagttggtgaaacacaccactgacaaa
acggaacaggggaaccttcggacagctctggattctatgagggatctggcccaatgtgta
aatgaagtgaaacgtgacagtgagactctcaaacaaatcacaagcttccagttatcgata
gaaaacctgaaccagtcactggctggttacggccgacccaaaatagacggagaactacgt
ttaatgactgtggacaaacgctccaagcaggatcgatatgtgttcttattcgataaagct
gttattatctgcaaacgcaaaggagagaattatgaaatgaaagaagtcattgacctacag
tattatcagataagggatgacccaatgggaagcaaagaaaccaaaaagtggagccatatg
ttcctaataattgaggctcatggccaacatggctttgagttcttcttcaagaccagggag
ctgaaaaagaaatggctggagcagtttgagatggctttatcgaacatcttcccggagaat
gggagttcaaacaaccacgattttcagatgcactcatttgaagagtcagcgacatgcaag
gcatgccagatgttactcaggggcactttcttccagggttatcgttgcagcaagtgcaag
tctgcggctcacaaagaatgtttagggagggtctctccatgtggaaggcaagatagtgga
tcatcaactttgaccaagagtaaaagtaacagaattgccccaagtcgtgcagctaaaaca
ggtttacccaaaacagaagtctgccaagaatattttgggatgcctcctccaccagtggct
ttcggacctgctttgaagttgctcttaggggatatcatcgaactcaccaaagcagaggtg
gagcagcagtggtgggagggaaggaacacatctacaaatgagattggttggttcccctgt
actaaagtaaagccctttgtatgtgcacctcaaatagactattcatccttttcctggtat
gctgggccaatggagcggagccaggcagaaactcttcttaacactcgctcagatggtacc
tacttagtaaggcagagagtgaaggatgccggggaatacgccatcagtatcaagttcaat
tcagaagtaaagcacatcaaggtgaccacagcagatggtttgttccgtgtgacagacaag
aaagccttcaaatcattactggaattggtggaattttaccagcagaattccctaaaggaa
tgttttaagacaatggatacagctttgcaacatccttttaaagaacccgaaaaaaggact
attcctaaattttcagggacgagtttgaagtgctttgggacagcaaaggctcgatatgat
ttctcagcccgagatcgatcggaactgagcctgaaagaaggcgacgtgattaaaatcatc
aataagaaaggatctcctggatggtggaaaggagaagtatatggcagggtcggatttttc
ccagcaaactacgtggaggaagattattccgattactgttactga
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