Rhincodon typus (whale shark): 109911010
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Entry
109911010 CDS
T06055
Name
(RefSeq) DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109911010
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109911010
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Topoisomerases
109911010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
109911010
NCBI-ProteinID:
XP_020365833
LinkDB
All DBs
Position
4:94806184..94912134
Genome browser
AA seq
814 aa
AA seq
DB search
MQINREVKIEQKESYDTTEKKVKESLLKRSTYQESFEDMLMGMDEQLKEFCARKQKNKDR
KHKEREKSNTANKRQEKEESSLSRLNEELKSTDSNSRETTEKLTSKEIPEEEDEHSEGLQ
ITKEDSGNQESKQIEKGDKQKNEDSSTRVSEDQDLNGDGIPVENNKKTKRVHCNTGSAHS
DVKLKKPKVEKSEDDELPQVCKLISGTCFVMFRCGATVTKIAFNNLNFKRSNSIVRTLRC
TVPIVQGVRFAGKRWEEEHYEDGVKWMFLEHQGPLFAPEYEPLPDGIDFYYDGNPMKLSL
AAEEVATFYAKMLDHEYTTKDVFRQNFFHDWRKEMNEQEKTIITDLDKCDFTQLHQYFTE
KAEAKKALPKEEKQKLKLEQDAITEMYGYCIMDGHRERIANFKIEPPGLFRGRGDHPKMG
KLKKRIMPEDVIINCSRDSNVPKPPENHHWKEVRFDNKVTWLASWTENVQGLLKYVMLNP
SSKLKGEKDWQKYEVARRLKEKIDAIRNQYHVDWKSREMKTRQRAVALYFIDKLALRAGN
EKEEGETADTVGCCSLRVEHIKLHENDNGQQCVVEFDFLGKDSIRYYNKVPVEKQVFKNL
KLFMENKDPADDLFDRLNTSDLNKHLQELMEGLTAKVFRTYNASITLQEQLAELTDPEES
IAEKILSYNRANRAVAILCNHQRTPPKTYEKAMKNIQAKIETKKEQLAVAKKDLKNAKVD
YKVKKDEKSKQIVEKKKKLLQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITIA
WCKKWHVPIEKIYNKTQREKFAWAIDMTDENFEF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaacagagaagtaaaaatcgaacaaaaggagagctatgatactacagaaaag
aaagtgaaagaaagcctattgaagagatcgacatatcaggaatcctttgaagacatgctg
atgggcatggatgaacagctcaaagaattctgtgccaggaagcagaaaaataaggacagg
aaacacaaagaaagggaaaaaagtaatactgccaataaacgacaagagaaggaagaaagt
agccttagcagattaaatgaagagctgaaatcaacagacagtaattctagagagacaact
gaaaaactgacgagcaaagaaattccagaggaggaagatgagcattctgaggggctacag
atcaccaaggaagattctggaaatcaagaaagcaagcagatagaaaaaggtgataagcag
aagaatgaggattcttctacaagggtgagtgaagatcaagatttgaatggagatgggatt
cctgttgaaaataataagaaaacaaaaagggtccactgtaacacgggttctgcccattca
gatgtaaaactcaagaaaccaaaagtagagaaaagtgaagatgatgaattacctcaggta
tgcaaactcatctctggcacatgttttgttatgttcagatgtggggctactgtgacaaaa
atagcctttaacaatttgaactttaagcgcagcaattcaattgttaggactttaagatgc
actgttcctattgttcagggagtacggtttgcagggaagaggtgggaagaagaacactat
gaggatggtgtaaaatggatgtttcttgaacaccaaggtccactgtttgcacctgaatat
gagccacttcctgatggtattgatttttattacgatggtaatcctatgaagttaagcctg
gcagcagaagaggtggctaccttctacgctaagatgctggatcatgagtacactacaaag
gatgtcttcaggcaaaacttttttcacgactggcggaaggaaatgaatgagcaagagaaa
acgataatcactgatctagataaatgtgatttcacacaactgcatcaatacttcactgaa
aaagcggaggccaagaaagcattgcccaaggaggagaaacagaaactaaaattagaacaa
gatgcaattactgagatgtatggctactgtataatggatggccatcgggaaagaattgca
aacttcaagattgagcctccagggctgtttcgtggacgtggcgaccatccaaagatggga
aaactaaagaaaaggatcatgcctgaagatgtcattatcaattgcagcagagattccaat
gttccaaaacctccagaaaatcaccattggaaggaagtacggtttgataataaagtgacc
tggttggcatcatggacagaaaatgttcaggggttacttaagtacgtcatgctcaatcca
agctcaaaacttaagggtgagaaggactggcagaagtatgaagtcgctcggcgcctgaaa
gaaaaaatcgatgcaatcaggaatcaatatcatgtagactggaaatcaagggaaatgaaa
acacggcaacgagcagtggcactatatttcattgacaagttggcattaagagctgggaac
gaaaaggaggaaggagagactgctgacacagttggttgctgctcactccgtgttgaacac
attaagttgcatgaaaatgataacgggcagcagtgtgtggtagaatttgacttccttgga
aaggactctattagatactataataaggttccagtggaaaaacaggtgttcaagaatcta
aaattgttcatggagaataaggatcctgcagatgacctgtttgacagattgaatacttct
gatctgaacaaacaccttcaggagttaatggaggggctcactgccaaagtgtttcgaaca
tacaatgcttccatcacgttgcaagaacagttggctgaattgactgatcctgaagaaagt
atcgcagaaaaaatcctgtcctacaatcgagctaacagagcagtggccattctttgtaac
caccagaggacacccccaaaaacttatgagaaagccatgaaaaacattcaggccaagatt
gaaacaaaaaaggaacaacttgcagtagcaaagaaagatctgaaaaatgccaaggtggac
tacaaagttaaaaaagatgaaaaatcaaaacagattgtagagaagaagaaaaagctgtta
cagaggatagaagaacaactgatgaaattggaagttcaagcaacagacagggaggagaat
aaacagattgcattgggcacgtccaaactcaactatcttgatcccagaatcaccattgct
tggtgcaagaaatggcacgttcctattgagaagatctataataagacacagcgagagaaa
tttgcctgggccatcgatatgactgatgaaaattttgaattctaa
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