Rhincodon typus (whale shark): 109911032
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Entry
109911032 CDS
T06055
Name
(RefSeq) glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109911032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109911032
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Glutamate (ionotropic)
109911032
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109911032
NCBI-ProteinID:
XP_048459922
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Position
12:complement(32438360..32915835)
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AA seq
919 aa
AA seq
DB search
MEVFAALIVSISWILYSDSVASDSIIHIGAIFEESARKDDKMFRLAVAEMNMNEEILQNE
KITFSVRFVDSNNPFQAVQEACDLVSQGILALVSSTGCAPSASLQSFADGMHIPHLYIQR
TPAGTPRSQCPITRNTRNSDYTLSVRPPDYFNEVILKVITEFSWQKFMIFYDDAYDIRGI
QEFLGQAGQQGIEISLQKVEASIGSMFTGLFSTLGFDELSRFRDMLRRALLFLNPRTAKT
FISEAVDTNLAAVDSHWIFINEEINDADIRELAKRLTGRLTVIRQTFPMSESKSQYCLRS
SHRFSSVMCNPKDPFTQHMEISNFYVYDSVLLLADAFHKKLEDRKWHSMASLTCVRKNSK
PWQGGKSTFDAIKKGKVSGLTGILNFRDDGTNTNVLFEILGTSYSEEKDRGIQRLGLWSP
TTGLNGSLVDQKLENSMEGVTLRVVTVLVPPFVMMSENIFGQPKEFCGFSIDVLNALSEH
LGFKYQIYQAPDNQHGRLQNNGKWNGMIGELINKMMLFFIKLCYFSFLGTGGDIPINTLA
VRLLMGFWWLFVFIIISTYTANLTAILTNNRIENPIRSFQDLAKQRDVPYGTVLDSEVLQ
IIKTKGRNPFELEQTYAHLWNMINKTNGLENCVKRIHDGIQRVKAGNYAFIWDVAALEYI
VENEPDCSLVTARNSKVDRGYGVALQDGSPYRDIFSHRLLELEQSGELDALKQKWWPKVG
KCDLQSHVKTHGKGGPMDLQNFAGAFCFLALGVILAFIAAVVEIWWKGEKKTDSPREASS
SVQHQDWWLMPELQKAQEEEPQSQEDNEIEIDQFQKQTDDFSKVSESSVKFSPSFVDLNS
FELSIMPTGENQEQYSDFRNTNLTMSTFIPEQMRRTSTCSLSAKTSSGLPLSGTAGQQTA
QYVCTSQNERDCSSPSSFL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttcgccgctctgattgtgtccatctcttggatcttatattccgacagtgta
gctagtgattccatcattcatataggtgcaatttttgaggaatctgcgagaaaggatgac
aaaatgtttcgattagctgtggctgaaatgaacatgaatgaagaaatactgcaaaacgaa
aagataacattctctgtcagatttgttgactccaacaatccatttcaagctgttcaagag
gcctgtgatcttgtgtcgcaagggattttggctcttgttagctctactggctgtgcacct
tcagcttcactgcagtcctttgcagatggaatgcatattcctcacctctacattcagcgc
acaccagctggaactccacgttctcaatgtcctattacaaggaatacaagaaacagtgat
tacacgctttctgtccgtcctcctgattacttcaatgaagtgattctcaaagtaatcaca
gaattttcctggcagaagttcatgatattctatgatgatgcatatgatattcgtgggatt
caagaatttttgggccaagctggtcaacagggaatagagatttcactgcaaaaggttgag
gccagcataggcagcatgttcacaggccttttctccacgcttgggtttgatgagctgagc
cgtttccgagacatgcttcgaagagccctacttttccttaacccacgtactgcaaagacc
ttcattagtgaggcagttgacactaatttggcagctgttgacagtcactggatcttcatc
aatgaggaaataaatgatgcagatattcgggagctggcaaagagattgactggcaggttg
actgtcattcggcaaactttcccaatgtcagaaagcaaaagtcaatactgtttgagaagc
agtcatagattttcttctgtaatgtgtaaccctaaagatcccttcactcaacacatggag
atctccaatttctacgtatatgacagtgttttgctgctggcagatgctttccacaaaaag
cttgaagatcgaaaatggcacagcatggctagcctgacatgtgtaagaaaaaattccaag
ccatggcaaggtgggaagtcaacttttgatgcaatcaaaaaggggaaagtgagtggatta
actggaatactcaattttagggatgatgggacaaataccaatgttctgtttgaaattctt
ggtaccagttacagtgaggaaaaggatagagggattcaacgtctaggtctttggagtcca
accactggattgaatggttctcttgttgatcaaaaactggaaaatagtatggaaggagtg
acactgcgagttgtgacagtactggtgcctccatttgttatgatgtcagagaacatattt
ggccaacctaaagaattctgtggattttcaatagatgttctgaatgctttgtctgagcac
cttggctttaaatatcaaatttatcaagctcctgataatcaacatggtagattacaaaat
aatggaaaatggaatggaatgataggagaacttattaacaagatgatgctgtttttcatt
aaattgtgttacttttcttttctaggaacaggaggagacatccccattaatactttggca
gttcgcttgttgatgggattttggtggctttttgtttttataatcatctcaacatacact
gcaaacttaacggccatcttgaccaacaatcgaattgaaaaccctattcgatctttccag
gaccttgccaaacagagagacgttccatatggtacagtccttgattcagaagtattgcaa
ataatcaaaaccaaaggtcgaaatccatttgagcttgaacaaacatatgctcatttgtgg
aatatgataaacaaaacaaatggcttggagaactgtgtgaagagaattcatgatggaatt
caaagggtaaaggctggaaattatgcattcatctgggatgttgcagccctggaatatatt
gtagagaatgagcctgattgctcccttgtcacagcaaggaattctaaagttgatcgaggt
tatggcgttgctcttcaagatggcagcccttacagagacattttttcgcacaggcttcta
gaacttgaacaaagtggtgaactggatgccctaaaacagaaatggtggcccaaagttggg
aaatgtgatttgcaaagtcatgttaagacacatggaaaaggaggcccaatggatctgcaa
aactttgctggagcattctgttttcttgctttgggtgttattttggctttcattgctgct
gtggtagaaatttggtggaaaggtgaaaagaaaacagactctcctagagaggccagcagc
tctgttcaacatcaggattggtggctaatgccagaattgcaaaaggcccaggaggaagaa
ccccaatcccaggaggacaatgaaatcgaaatcgatcagttccagaaacaaacagatgat
ttctctaaagtcagtgagagctctgttaaattttcaccatcatttgtagacttgaattca
tttgaactatctataatgccaactggtgaaaatcaagaacaatatagtgatttcaggaac
actaatttgacaatgtcaaccttcatacctgagcagatgcggaggacaagcacatgtagc
ttatcagctaagacttcatctggattgccactgagtggtacagctggtcaacaaactgca
caatacgtatgcacatcacaaaatgagagagattgtagcagtccttcttccttcctctga
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