Rhincodon typus (whale shark): 109911046
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Entry
109911046 CDS
T06055
Name
(RefSeq) BRCA1-associated protein isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109911046
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109911046
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109911046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
RRM_1
zf-C3HC4_3
PUF_NOP9
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
109911046
NCBI-ProteinID:
XP_048467322
LinkDB
All DBs
Position
24:complement(25294170..25324121)
Genome browser
AA seq
474 aa
AA seq
DB search
MSVSLVAVRLELANHSHHPEGFEYCAVTMADDESKEKKSLSSAKLLLEGKTTGEKSTILH
QHIGRREMRDMVIETITSSKDKDTVDCVLKSEQKTSCGTNPLEKASTADPNENNKVCKDQ
SGNAPDSPSKQLPDQISFFSGNSSVEVVHGIMHLYKTDKMTSLKEDVRRSAMLCILTVPA
TMTSHDLMRFVAPFDDSIEHMKIIRDSTPNQYMVLVKFCSQAEADSFYTACNGRQFNSIE
DDVCQLVYVERAEVIKSEDGASLPVMGVTELPPCIVCLERMDESVNGVLTILCNHSFHSH
CLQHWEDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFE
ETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQDEKIDALQLEYSY
LLTSQLESQRIYWENKIVHLEKDAAEEIVTQTNWPMGPHGNAITGYDIANNQKI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttcacttgtggccgtacgtctggagctggcgaaccactcgcaccatccggag
ggtttcgagtattgcgctgtaactatggcagacgatgaaagtaaagagaagaaatcgctc
agttcagcaaagctcttgctggagggtaaaacaactggagaaaaatccactatcttgcat
caacacattggtcgtagagagatgagagacatggtaattgaaactataacctccagcaaa
gacaaagatactgtggattgtgtactgaaatcagagcaaaagaccagttgtggcaccaac
cctctggaaaaagcaagtactgctgatccaaatgaaaacaataaagtgtgcaaagatcag
agtggtaatgcaccagactcgccatccaaacagctgcctgaccaaatttctttctttagt
gggaattcatcagttgaagtagtacatggaatcatgcatctctacaaaactgacaagatg
acatccttaaaagaagacgtgagacgaagtgccatgttgtgtatccttactgtccctgcc
accatgactagccacgatcttatgagatttgttgcaccatttgatgattcaattgagcac
atgaaaataataagggattcaaccccaaaccaatatatggttcttgtcaaattctgttca
caggcggaagcagacagcttttatactgcctgtaatggtcggcaatttaattcaattgag
gatgacgtttgccagctggtatatgtggaaagggctgaggtcatcaaatctgaggatgga
gccagtcttcctgtaatgggtgtaactgagttaccaccatgcattgtgtgccttgaaaga
atggacgagtctgtaaatggtgttctaacaattctctgtaatcatagctttcatagtcat
tgcttgcaacactgggaggatacaacgtgcccagtttgcaggtactgtcagaccccagaa
ccagttgaagaaaacaaatgttttgagtgtggagttcaggagaacctgtggatttgtttg
atatgtggacacataggatgtggccgatatgtcagtcgtcatgcatataaacactttgaa
gaaacacaacacacgtatgccatgcagctcactaatcacagagtttgggactatgcagga
gataactatgttcatcgtttggtggccagtaaaacggatggaaagattgtccagtatgag
tgcgagggtgacacttgtcaagatgaaaagattgatgcccttcaattagaatattcatac
ctcctgactagtcagctagaatctcaacgcatctactgggaaaacaaaatagtacatttg
gagaaggatgcagcagaagagattgttacacagaccaattggccaatgggcccacatggg
aatgccatcactggatatgatattgcaaataatcagaagatatag
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