Rhincodon typus (whale shark): 109911054
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Entry
109911054 CDS
T06055
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109911054 (matn1)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
109911054 (matn1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_3
Copine
hEGF
EGF_LRP2
vWA-TerF-like
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
109911054
NCBI-ProteinID:
XP_020365883
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All DBs
Position
27:7965755..7993274
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AA seq
497 aa
AA seq
DB search
MTGLLSGLLLSALILVQVNGVPKVQPLRSGPQVSAGLCRSKPTDLIFIIDSSRSVRPSEF
EQVKVFVSQVIESLDIGLNATRVGVVNYASTVKNEFPLNAHRNKAGVLRAVSQIQPLSSG
TMTGLAIQFATNIAFSESNGARVKNGAASKVAIIVTDGRPQDRVQESATRAKQSGIEIFA
IGVGKAEMSSLREIASEPLEDHLDYVESYSAIEKLSNKFQEAFCVVDLCASGDHDCEHIC
VSTPSSYKCACNEGFTLNPDGRTCSTCSSGGIDLAFVIDGSKSVRPENFQLVKKFINQIV
NTLEVGDQNARITLIQYSSSVRTEFPLNKFKTKQDIKAAVKNMEYMERGTMTGLALQHLS
EKVFVPSQGARENIPKVGIVFTDGRSQDYINDFAQKAKDQGIRMFAVGVGNALEEELRII
ASDPVKDHYYYTADFKTMNKIADKLQVKICAAPIKDPCACESLVEFQTNVEKIIKTLTAK
LGAFTKKLAALENRLLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgggacttctcagtggattgctcctctcagccctaatcctggttcaggtgaatggc
gtacccaaagtccaacctctcagatctggtccacaggtttcagctggtctgtgcaggagt
aaaccaactgacctaatctttattattgacagttctaggagtgtacgcccatctgaattt
gaacaggtgaaagtgtttgtatctcaggtaattgaatctcttgacattggtctaaatgcc
acccgcgtcggggtggttaactacgccagtaccgtcaaaaatgagttccccctcaatgca
catcgcaacaaggcaggcgtcctgcgagctgtctcccagatccagccactctcctctggt
accatgactggcctcgccatccaatttgcaaccaacattgctttcagtgagtctaatggg
gcacgggtcaagaatggcgcagccagcaaggttgccatcattgtgaccgacggccggccc
caggaccgagtgcaggagtcagccactcgagccaagcagagtggcattgagatatttgcc
attggcgtgggcaaggcagagatgagctcactgcgtgaaattgccagcgaacccctggaa
gaccacttagactatgtggaaagctacagtgctatcgaaaaactttccaacaaattccaa
gaagccttctgcgtggtggatctttgtgccagtggagatcatgattgtgaacacatctgt
gtgagcactcctagctcttacaaatgtgcctgcaatgaaggattcacattaaatccggat
ggaagaacatgtagcacttgcagttcaggaggcattgatttagctttcgtcattgatggg
tcaaagagtgtgagacctgaaaacttccagctggtaaaaaaattcatcaaccagattgtc
aataccctagaggttggtgatcagaacgcacgtatcaccctcattcagtactccagctca
gtcaggacagaattccctctcaacaagttcaaaaccaaacaagacattaaggccgcagtc
aagaacatggagtacatggagagaggaacaatgacaggcctggccctacaacatctgtct
gaaaaagtcttcgttccatcacaaggagcgagggaaaatatcccaaaagtcggaattgtc
tttacagatggtcgttcacaggattacattaatgattttgctcaaaaagccaaagatcaa
ggaattaggatgtttgcagttggagtggggaatgcacttgaggaagaattaaggattatt
gcttcagatccagtgaaggatcattattattatactgcagatttcaagacgatgaacaaa
attgctgacaaattacaggttaaaatatgtgctgcacctattaaagatccttgtgcctgc
gaatcactcgtggaattccagacaaatgtcgagaaaataatcaaaacactgacagcaaaa
ctaggtgcctttacaaaaaaactggcagctcttgagaacagacttcttgtctaa
DBGET
integrated database retrieval system
