Rhincodon typus (whale shark): 109911061
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Entry
109911061 CDS
T06055
Name
(RefSeq) LIM/homeobox protein Lhx2 isoform X1
KO
K09373
LIM homeobox protein 2/9
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109911061
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
109911061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109911061
NCBI-ProteinID:
XP_020365893
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All DBs
Position
28:22337890..22366045
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AA seq
391 aa
AA seq
DB search
MLFHGISGGEMQGVMEEMERRSKNEPGISSGVDMGERETTMPSISNERPALCAGCGGKIS
DRYYLLAVDKQWHMRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSVQRCARCHLG
ISASEMVMRARDLVYHLNCFTCTTCNKMLATGDHFGMKDSLVYCRIHFETLIQGEFQAHF
NHTDVGAKSGAALGLPFYNGMGTVQKGRPRKRKSPGPAADLTAYNTALSCNENDGDHMDR
EQQYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQN
ARAKFRRNLLRQENAGVDKASDGTVLQAATPSGPASEISNASLSPSSTSTTLTDLTNPSM
PTVTSVLTSVPGSLEAHESRSPTQTTLTNLF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcttttccacggaatctcggggggtgaaatgcagggagttatggaggagatggaaaga
cgatccaagaacgagccaggaatcagctcgggggtagacatgggggagagagaaacgact
atgccgtccattagtaacgagagaccggctctgtgtgcaggctgtggggggaagatctca
gaccgttattatctgctggctgtggacaaacagtggcacatgcgctgcctcaaatgctgt
gaatgcaaactggccctggaatccgaactgacctgcttcgccaaggatggcagcatctat
tgcaaagaagattactacaggagattctccgtgcagaggtgcgccagatgtcacctgggc
atctcagcatcagaaatggtgatgagagctagagacttggtctatcacttgaactgtttc
acgtgtacgacctgcaacaagatgctggcgaccggggatcactttggcatgaaggacagc
ctggtgtactgcaggattcacttcgagactctgattcagggggaatttcaggctcacttc
aatcacacggacgtgggcgccaagagcggcgctgccctgggcctgccattctacaacggc
atgggcactgtgcagaaaggacggccccgtaagaggaaaagcccaggaccggcggctgac
ctgacagcttacaacacagcgttaagttgtaatgaaaatgacggtgaccacatggacaga
gaacagcagtaccctcccactcagaagacaaagcgcatgcgcacctccttcaagcaccac
cagctgaggaccatgaaatcttactttgccattaatcacaatcctgatgccaaggacctg
aaacagctagcacagaagacagggcttacaaagcgagttctgcaggtttggttccaaaat
gcaagagcaaaattcagaaggaatctattacgtcaggaaaatgcaggggttgataaagca
tctgatggtacagtacttcaagcagcaacgccgtctggcccagcatcagaaatttccaac
gcctctcttagcccttcaagcacttctactactttaactgacttgactaacccttctatg
ccaaccgtgacgtcagttttgacgtctgtgcctggtagcctcgaagcccacgaatcccga
agccctacacaaactactctcacaaaccttttctga
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