Rhincodon typus (whale shark): 109911117
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Entry
109911117 CDS
T06055
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109911117 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109911117 (fancd2)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
109911117 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
CCDC53
FANCI_S2
AP3D1
PGA28-like_dom
RPN2_C
Motif
Other DBs
NCBI-GeneID:
109911117
NCBI-ProteinID:
XP_048462642
LinkDB
All DBs
Position
16:complement(10141820..10193061)
Genome browser
AA seq
919 aa
AA seq
DB search
MCYSNNLNYQESLIKLLLGIEILQPSVMNTLFEKIPEFMYDGIPEDGINMPRLIISQFKW
LDRIIDSKDLTSKIMQLISVAPLEIQQDIIISLPEILEDAQHNEIAKELNSLLQRNTQLT
VPILDALSSLNLQAELLIEVRHSVMSTLSAVKLDDLPVIVKFIFHAITTEDAVEVITELR
MNLGLESCVLPSQLQISWDKQKQKSVTGALVNQENGGHDCVAIMFDVIKAAVRFQKATAE
AWIKAIEVVDSAAGHKVIDLLVLLILHTTSTSNIKKQVEKLLRSKIRLGHIGDQLLQVAF
RSHALVVREYFPSVLSLAQTLLRSSDVTVVSFGSLMYKHAFMMFDSYCQQEVVGALVTHV
CSGFTTEVDVSLDVLTDLVSQNSSTMAVYAIFVKGILDYMDNLSPQQIRKLFFVLSTLAF
SRWQEGSHIQDDMHIVIRKQLSSTISKYKRIGIIGAVMMVGCMAYDRSKIEPSSSDLPSM
SKESFRQATALLELVRTSSEQSPEAAALYYDELANLVQKGKLDPQVQELIGRSVLDDFQE
DFVVDLLPETNSESVLPLKSMYDLDEEDTEGGIVINLLTLLSNSMIGNGFENAAGKQKNK
KCVSPVYLASFFRLLRFCEEVQHNGNLEEIDALLGCPLYLTNFELVEKLESLSKQERELL
CSLLFHTLNWFREVVNAFCKQQDTEMKGKVLLRLQNITHLQVLLEKCLAATPGYIPPLAN
FDLEVTEVPLTASHAATTKKGKKDQKGKKKQKSEGNKNSSTDSSQTEEPTEESQVQSEST
QGKENTEEGKVFINLSNYRAYFRELDTDVFFVLRCRLVTKSLLETELRTKATEVVQLRSA
ELMFLLEDLARKLDYMLVATAAKKMLFLKVKGDRDVGFSHLRQMTPQELAQTAVELLNPL
CNHLENVHNYFQIIKLHSI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtgttacagtaacaacttgaactatcaggaaagtctcataaagctccttcttgggatt
gagattctgcagccttctgttatgaacacattatttgaaaaaattcctgaatttatgtat
gatggtattccagaggatggaattaacatgccacgactcatcatcagtcagtttaaatgg
ttggacaggatcatagatagtaaggatttgactagtaagattatgcagctgattagtgtt
gctcctcttgaaattcagcaggatatcatcatcagcttgccagaaattttggaagatgcc
caacacaatgaaattgccaaagaacttaattccttgttgcaacggaacactcagctgaca
gtgcccatcttggatgccctctctagcctcaatctacaggctgagctattgatagaggtg
cgccattctgttatgtcgaccttgtctgcagtgaaacttgatgatctccctgtaattgtc
aagttcattttccatgccatcacaacagaagatgctgtagaggtgattacagaattgcgg
atgaatctaggattggaatcttgtgtgcttccttcacaactgcagattagctgggacaag
cagaaacagaagagtgttacaggagctttagtgaatcaagagaatggtggtcacgactgt
gttgcaatcatgtttgatgttatcaaagctgcagtaaggtttcagaaagcaacagctgag
gcttggattaaggctattgaagtggtagattctgctgctgggcacaaggttatcgatctg
ttggttctcctaatcctccacacaaccagtacaagcaacatcaagaaacaagtggagaaa
ctgttacgtagcaaaattcgtcttggccatattggggatcagcttttgcaggttgcattc
agaagtcatgctctggttgtccgtgagtactttccctctgttctgtccttggctcagacc
ctcttgagatcctcagatgtgactgtggtgtcatttggcagtctaatgtataaacatgca
tttatgatgtttgattcctactgtcagcaggaagttgttggtgcactggtgacacatgtt
tgcagtggtttcactacagaggtggatgtctcacttgacgtgcttacagacctggtttcc
cagaattcgtctacaatggctgtttatgctatatttgtgaagggtatcttggattacatg
gacaacttgtctccccaacagataagaaagctgttttttgtcctgagcacattggctttt
agcagatggcaggagggcagccacattcaggatgacatgcacattgttattaggaaacag
ctgtctagtacaatatccaaatacaagcgaattgggatcattggggcagtcatgatggtg
ggctgcatggcttatgacagaagtaaaattgaaccctcatcatcagacttgccatccatg
agtaaagaatccttcaggcaggccactgccctgcttgaattggtacgcacctccagtgag
cagtctccagaagctgctgctctctactatgatgaattggctaacttggtgcagaaagga
aagctggatccacaagtgcaggaattgattggcagaagtgtacttgatgattttcaagag
gactttgttgtagacctgctgccagaaacaaatagtgaatccgtgttgccactgaagtca
atgtatgatctggatgaagaggacactgaaggtgggattgttatcaatcttctaacactc
ctatccaatagcatgatcggcaatggctttgaaaatgcagctggcaagcaaaagaacaaa
aagtgtgtttctccagtatatcttgcttcctttttccgtctactgcgattctgtgaagag
gtgcagcacaatggaaacttggaagagattgatgctttattaggttgtccactttacctg
actaactttgaactggtggagaagttggagtcactatccaaacaggagcgggaacttcta
tgctcactgctgtttcacactctcaattggttcagagaggtcgtgaatgcattctgtaaa
cagcaggacactgagatgaagggcaaggtacttctccggctgcagaacattacacatcta
caggtgttactggagaagtgtttggcagcaacacctggatatatccctccactggcaaac
tttgatttggaggtcactgaggttcctctgactgcatctcatgcagcaacaactaagaaa
ggaaagaaagatcaaaagggtaagaagaaacagaaatctgagggtaacaagaattcttct
acagacagctctcagaccgaggagcctacagaagaaagtcaagtgcaatctgaaagtaca
caagggaaggaaaacacagaagaagggaaggtctttataaatttatccaattacagagcc
tactttagagagctggatacagatgtattctttgtcctacggtgtagactagtaaccaaa
tccctattggagactgaactacgtaccaaggctactgaagttgtgcagctgaggtcagct
gaactaatgtttcttctggaggacctagctcgtaaattagactacatgttggttgcaact
gctgcaaaaaaaatgctcttcttaaaggtcaaaggtgatcgagatgtcggattttcgcac
ttacgccaaatgactccacaagaacttgctcagactgctgtagaattgctcaatcccttg
tgtaaccatttggaaaatgttcacaattacttccagataatcaagctacatagtatttga
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