Rhincodon typus (whale shark): 109911155
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Entry
109911155 CDS
T06055
Name
(RefSeq) poly(A) polymerase alpha isoform X2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109911155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109911155
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109911155
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109911155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
109911155
NCBI-ProteinID:
XP_020366010
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Position
8:complement(11514207..11842623)
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AA seq
763 aa
AA seq
DB search
MPYPAANQGSLQLQTQKHYGITSPISLASPKENDFVLTQKLIEALKPFGVFEEEEELQHR
IAILGKLNSLVKEWIRDTSEIKNLPSSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHIERVDFFTSFCEKLKQQDEVRNLRAVEDAFVPVIKLSFDGIEIDILFARLALQTIPED
LDLRDDVLLKNLDLRCIRSLNGCRVTDEILHLVPNIENFRLTLRAVKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMMEEFKQGLSITDEILMGKMEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILISSLEKNEFITLAHVNPQSF
PAPKDNPEKDEFSTMWVIGIVFKKVENTENLSVDLTYDIQSFTDTVYRQAMNSKMFETDM
RIAAMHVKRKQLHLLLPSYVQQKKKKHSLEGSKANCDDENSMEASLDSDHSLLVPSSPLQ
NSSSPQSPVTAALSVNASSVQNSEAQPESETSPSKRNSIPSSGGSSSSTSEHIPQASSIP
ASIAQPKSLVTRLLPTCVSSQPPNVPTKASSPVASGRKRPASPSTNESAKKEEPAMNGVT
VDQNPLQNLKRVSTQTSEISPKRKKLDGSGCVKEQGDCSRSPVNEKTVDENMKEVESEEK
LAPIASKASASQEPTSTELSDVSSLPVNPVPVVKNSIKLRLNR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccataccctgctgcaaatcaaggatctctgcagctccaaacacaaaaacattatggc
attacatctccaattagtttggcttcgccaaaagaaaatgattttgtgcttactcagaaa
ctcattgaagcattgaaaccttttggagtctttgaagaagaagaggagctgcagcacaga
attgcaattctgggaaaacttaatagcttagttaaagagtggatccgggataccagtgaa
attaagaaccttccatcgtctgtaatagagaacgttggtgggaaaatttttacatttggt
tcctacagattaggggtacatacaaaaggtgctgatattgatgctctgtgtgttgcacct
cgccacattgaaagagttgacttcttcacgtccttttgcgaaaagctgaagcagcaagat
gaagtgaggaatttacgggctgttgaagatgcttttgtaccagtaattaaactatctttt
gatggtatagagattgatattttatttgcaagattggcacttcagacaatccctgaagat
ttggatcttcgagatgatgtactacttaaaaacttggacttgagatgcattagaagtctt
aatggttgcagagtcactgatgaaatattacatctagtaccaaacattgaaaattttagg
ctgacattgagagcagttaaattatgggccaaacgccacaatatttactcaaacatacta
ggctttctgggtggtgtgtcatgggccatgttggtggcaagaacatgtcagctgtacccc
aatgctgttgcatccactctagtacacaagttctttttggtattttcaaaatgggaatgg
cctaatcctgtcttattaaagcaaccagaggactgcaatctgaatctaccagtatgggat
ccacgggttaacccaagtgacagataccatctcatgccaataatcacaccagcctatcca
caacaaaattctacatacaatgtctctgcatctacacgtgcagtgatgatggaggagttt
aagcaaggtctttcgatcacagatgaaattttaatgggtaaaatggagtggtccaaactc
tttgaagctccaaacttctttcagaagtacaagcattacattgtgttgctggcaagtgcc
ccaacggaaaaacagcacttagagtgggtgggcttggtggaatccaaaatccgaatcctt
attagcagcttagaaaagaatgagttcattactctggctcacgttaatccgcagtcattc
ccagctcccaaagacaatcctgagaaggatgaattcagcacaatgtgggtcattggaata
gtctttaagaaagtggaaaacactgagaatctgagtgttgacctcacttatgacattcag
tcattcacagatactgtttatagacaagcaatgaacagcaaaatgttcgaaacagatatg
aggattgcagcaatgcatgtgaaaaggaaacagctccatttgcttctacctagttatgtc
cagcaaaaaaagaaaaagcattcattagaggggagcaaagccaactgtgatgatgaaaat
agcatggaagcttctctggacagtgaccacagcttgctagtgccttctagtccattacag
aattccagcagcccacagagtcctgttactgcagcattgtcagtgaatgcaagcagtgtt
cagaattcagaagcacagccggaatctgagactagtccttccaaaagaaattccattccc
agctcagggggctcatcttcgtcaaccagtgaacacattcctcaggcctcatccatacct
gcttctatcgcacagccaaagtcgctagtcacccggcttttacctacatgtgtcagcagt
cagcccccaaatgtgcccacaaaagcatccagccctgttgcctctgggagaaagagacca
gcatcaccatcgacaaatgaatctgcaaagaaggaggaacctgcgatgaacggtgtaact
gttgatcaaaatccattgcaaaacttgaagagagtatcgactcagacatctgaaatttca
ccaaagagaaagaagctagatggatctggctgtgtgaaggaacaaggtgactgttcaaga
agtcctgttaatgagaaaacagtcgatgaaaatatgaaggaagttgagtctgaagaaaaa
ctggcgccaatcgcatccaaggcttctgcctcacaggaaccaacgagcacagagctgtct
gatgtctcttcccttccagtaaaccctgttccagtagttaaaaattcgataaagctgagg
ttgaatcggtag
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