Rhincodon typus (whale shark): 109911160
Help
Entry
109911160 CDS
T06055
Symbol
sntg1
Name
(RefSeq) gamma-1-syntrophin
KO
K24065
gamma-syntrophin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109911160 (sntg1)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
109911160 (sntg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Syntrophin_4th
PDZ_6
CDT1_C
CBM_17_28
Motif
Other DBs
NCBI-GeneID:
109911160
NCBI-ProteinID:
XP_048452081
LinkDB
All DBs
Position
4:complement(66121306..66297124)
Genome browser
AA seq
524 aa
AA seq
DB search
MQRRSEREERRLTQKKLGQLVRLFLEQRRLQGIIVDIAKMMRELIPVTADAGERRVLFTA
RLLTQQVWQSCREKTETKTGICLLQDGSQEPFEVRLHLAKDILTIQEQDVICVSSEAFYS
SERTVSIRRQTIGGFGLSIKGGAEHNIPVIISKISKEQRADLSGLLFIGDAILQINGINV
RNCKHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLYEDCTCVPSDQSSGTSSPLCDSG
LHLNYHPNNTDSLSCSSWPTSSGLKWEKRWCDLRLIPLLHSRLSHYIPGTDIVRQNAFQV
IAVDGVCSGVIQCLTAEDCIDWLQALAINISNLTKHNIKKINRNFPVNQQIIYMGWVEDR
EPDSLQDKLYTPKYLAVRGSCLYKFTAPPVTTLDWTKAVRSYTVYEIMCKILKCKTYACV
LESHLMGLTIDFNMGFVCFDAASKIVLWRYKFSQLKGSSDDGKSKIKFLFQNIDTKQIEA
KELEFSNLFAVLHCIHSFFAAKVACMDPLYIGSQPVVGKAKYSN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgttcagaaagggaagaaaggaggcttacacagaagaagttgggacagtta
gtacggctcttcttggagcagaggaggctacaaggcatcatagtagacattgccaagatg
atgagagaactaatccctgtaactgcagatgctggagagcggagagtgcttttcacagca
agactgctaacacagcaagtctggcagagctgtagagagaaaacagagacaaaaacagga
atttgtttgctccaagatggaagtcaagagccttttgaagtgcgattgcacttagcaaag
gacattttaacaattcaggagcaagatgtcatctgtgtctctagtgaagccttctattca
agtgaaagaacagtttcaatcagaagacagacaattggtggatttggtctaagtataaag
ggtggagctgaacacaatattccagtgattatatcaaaaatctcaaaggaacagagagct
gacctgtctggcttgctgtttattggagatgctatccttcagataaatggaataaatgtt
aggaactgcaaacatgaagaagtggttcaagttctgcgtaatgctggggaagaagtaact
ctcacagtttcatttttaaagagagcacctgccttcttgaaactccctttgtatgaagac
tgcacatgtgttcccagtgaccaaagcagtggtacatcttccccactttgtgacagtgga
ttacatcttaactaccatcccaacaacacagattcactctcatgttcttcatggcccaca
tcctcaggcctaaagtgggagaagcgctggtgtgatctacggctaatcccccttcttcat
tctcgtttgtcacattatattccaggaactgatattgtcaggcaaaatgcatttcaagta
attgctgtcgatggtgtctgcagtggtgtcattcagtgtctcactgctgaagactgtata
gattggttgcaagcactggccattaatatatccaaccttaccaagcacaatattaaaaag
ataaacaggaattttcctgtaaatcaacagataatctacatgggctgggtagaagaccgg
gagccagactcattgcaagacaaactatacacaccaaagtatttagctgtgagaggctct
tgcctatacaaatttacagcacctccggtgaccacattggattggacaaaagcagtgagg
agttacacagtctatgaaattatgtgcaaaattctgaagtgtaagacttatgcttgtgtg
ctggagagtcacctcatgggactgacaatagacttcaatatgggttttgtatgcttcgat
gctgcatcaaagattgttctctggagatataaattttcacagctgaaaggctcttcagat
gatggaaaaagcaagataaagtttttattccagaacattgacactaaacaaattgaagca
aaggagctggaattttccaaccttttcgcagtacttcattgtatacactccttttttgct
gctaaagttgcttgcatggatcctctctacattggaagccagcctgttgttgggaaggcc
aagtacagtaactga
DBGET
integrated database retrieval system
