Rhincodon typus (whale shark): 109911256
Help
Entry
109911256 CDS
T06055
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X3
KO
K16474
intraflagellar transport protein 88
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109911256 (ift88)
Cilium and associated proteins [BR:
rtp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109911256 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_6
TPR_7
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_9
SNAP
ARM_TT21_5th
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
TPR-S
ARM_TT21
TPR_MalT
RPN7
DUF2225
ARM_TT21_2nd
ARM_TT21_N
TPR_15
HAT_PRP39_C
DUF6584
ARM_TT21_C
Coatomer_E
HEAT_Nup120
RNPP_C
Consortin_N
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
109911256
NCBI-ProteinID:
XP_020366142
LinkDB
All DBs
Position
6:complement(38641520..38777631)
Genome browser
AA seq
775 aa
AA seq
DB search
MTAKIPSTGAVVRSFGNMGARVPLASSVGRPATGAIQDGITVARPMTAVRAAGYSSAAYR
GTTFDPLGQSRGPAPPLETKNEDTPEEKVKNLEKTVNELIEESCIANRCGDLQLALEKAK
EAGRKERILVRQREQTASSDHINLDLTYSVLFNLASQYAANDMYAEALNTYQVIVKNKMF
NNAGRLKVNMANIYFKQRNYPKAIKFYRMALDQISSSHKEMRIKIMQNIGVVFVKMGQYS
DAITSFEHIMSESPNLKTSFNLILCYFAIGDREKMKKAFQKLIVVPLGIDEDDKYIPPND
DPHMNLVIEAIKNDPLRQMERERKAMAERFIMTAAKLIAPAIEASFASGYDWCVEMVKAS
QYVELANDLEINKAITYLRQRDFNQAVETLKMFEKKDSRVKSAAATNLSFLYFLENDFGL
ADRYADLAMSADRYNPAALTNKGNCVFVRGDYEKAAEFYKEALRNDSSFTEALYNLGLTY
KKLNRLEEALDCFLKLHAIMRNSAQVMYQIANLYEMLEDLTQAIEWLMQLISVSPTDPQA
LAKLGDLYDNEGDKSQAFQYYYESFRYFPSNIEGIEWLGAYYIDTQFCEKAIQYFERAAL
IQPTQVKWQLMVASCYRRSGNYQKALETYKDIHQKFPENAECLRFLVRLCTDMGLKEVQE
YATRLKKVEKMKELKEQRVKSGRDSSARGRREGSAGSENGQSSYVTSAKGERMSAKLKSL
PGVNDPYETSNNKDIDASYVDPLGPQIERPRTAARKRVEEDEFADEELGDDLLPE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaaaataccaagcactggagcagttgtacgttcctttgggaatatgggggca
agagtgcctttggcctcttcagtgggaaggcctgcaacgggagctattcaggatggaatc
acagttgctagacctatgacagcagtacgtgcagctggctattcttctgcagcttacaga
ggcactacatttgatccactggggcaatcaagaggtccggctccaccccttgaaacaaag
aacgaagatacgccagaggaaaaagttaagaatttagagaagactgtgaatgaattgatt
gaagaaagttgcattgccaatagatgtggtgacctacaattggccctggaaaaagcaaag
gaagcggggagaaaggaaaggatactggtgagacaaagagagcaaacagcatcttcagat
catatcaatctggatcttacttactcagtacttttcaatttagccagccaatatgcagcc
aatgatatgtatgcagaagctttaaatacctaccaagtgatagtgaaaaacaaaatgttc
aataatgcaggtcggttaaaggtaaacatggcaaatatttacttcaagcagagaaattat
cctaaagcaataaaattttatcggatggcattggatcagatatcaagttcccataaagag
atgaggattaaaataatgcagaacattggtgttgtatttgtcaaaatgggacagtactct
gatgctatcacctcctttgagcatatcatgagtgaaagcccaaatttaaaaaccagcttt
aatctcattctatgttactttgccattggtgatcgtgaaaagatgaagaaagcattccag
aaacttattgtggtcccacttggtattgatgaagatgacaaatacattccacctaatgat
gatccacatatgaatctggtgattgaagccatcaagaatgatccactcagacaaatggag
cgagagcggaaagcaatggcagagagatttataatgacagcagctaagttgatagcacca
gcaattgaagcatcatttgcatctggatatgactggtgtgtggaaatggtgaaggcttcc
caatatgttgaactagctaatgacctggaaattaacaaagctattacttacctgcgacag
agggattttaaccaggctgtagaaaccctgaaaatgtttgagaagaaggatagcagggtt
aagagcgcagctgcaacaaatctctctttcctttactttttggaaaatgattttggactt
gcagaccggtatgctgaccttgctatgagtgctgatcgatataatccagcagcactgaca
aataaaggaaactgtgtctttgttcgaggcgactatgagaaagcagctgaattttataag
gaagctttacggaatgattcctcttttactgaggcactctataacttgggtcttacttac
aagaagttgaatagactggaggaagctttggattgtttcttgaagctccatgcaatcatg
aggaacagtgctcaagttatgtaccagattgcaaacctatatgaaatgttggaagatctg
actcaagctattgagtggctcatgcagttgattagcgtttcccccactgacccacaggca
ctggctaaattaggggacctgtatgacaatgaaggagacaagtcccaggctttccaatat
tattatgagtcatttaggtattttccatcaaacattgagggcattgaatggcttggagcc
tactacattgacacacagttctgtgaaaaagcgattcagtactttgaaagggcagcactt
atccaacctactcaagtcaaatggcaattaatggtggctagctgttatcggagaagtggt
aactatcaaaaggcattggaaacctacaaagacattcatcagaaatttcctgaaaatgct
gaatgtttgcgctttctagttcgcctttgtaccgatatgggactgaaagaagttcaggaa
tatgccacgagactaaagaaagttgaaaagatgaaagagttaaaagaacagcgtgtgaag
tctggcagagatagcagcgcacgtggtcgcagagaaggaagcgctggtagcgaaaatggt
caaagtagctatgttaccagtgctaaaggagaacggatgagtgcaaagttgaagtcattg
cctggagttaatgatccctatgaaacaagcaacaataaagatatagatgcttcatatgtg
gatccgcttgggccacaaatagaacgacccagaactgcagctcgaaaacgggttgaagaa
gatgaatttgcagatgaagaacttggagatgatttgttaccagagtaa
DBGET
integrated database retrieval system
