Rhincodon typus (whale shark): 109911328
Help
Entry
109911328 CDS
T06055
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03030
DNA replication
rtp03410
Base excision repair
rtp03420
Nucleotide excision repair
rtp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109911328 (rfc2)
03410 Base excision repair
109911328 (rfc2)
03420 Nucleotide excision repair
109911328 (rfc2)
03430 Mismatch repair
109911328 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109911328 (rfc2)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109911328 (rfc2)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109911328 (rfc2)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109911328 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
109911328 (rfc2)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109911328 (rfc2)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109911328 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
109911328 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
AAA_14
Viral_helicase1
Mg_chelatase
AAA_24
Rad17
AAA_11
AAA_assoc_2
RuvB_N
DNAX_ATPase_lid
nSTAND3
MipZ
AAA_18
AAA_19
AAA_5
AAA_28
ABC_tran
AAA_30
AAA_25
AAA_23
NTPase_1
MeaB
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
109911328
NCBI-ProteinID:
XP_020366205
LinkDB
All DBs
Position
26:40663435..40688193
Genome browser
AA seq
375 aa
AA seq
DB search
MSAREAVKTMETAVEGESDTSLGLVHTTGDGEAPELKEHRASASSAAGRTVPAAYELPWV
EKYRPLKLNEVVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALK
DAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTME
IYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLMQVVEKENVRYTDDGLE
AIIFTAQGDMRQALNNLQSTHSGFGFVNSENVFKVCDEPHPLLVKEMIQHCVNANIDEAY
KVVAHLWKLGYSPEDIIGNIFRVCKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAG
LLARLCQKTAAPPAS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcgggaagcggtgaaaaccatggagacggcggtggagggtgagagcgacacg
agcctgggcctggtacatacaacaggggatggtgaggccccggagcttaaggagcacagg
gcttcggcttccagtgctgccgggcgaacggtgccggctgcgtatgaattgccctgggtt
gagaaatacagaccactgaaactgaatgaagttgtgggcaatgaggaaacagtcagcagg
ttggaggtattcgcaagggaggggaatgtacccaacatcataattgcaggtccacctggc
accggaaaaacaacaagcatcctgtgcttagcacgtgcactgttgggacctgcactgaaa
gatgctgttcttgaactcaatgcctcaaatgaccggggtattgatgtggtcagaaacaaa
atcaaaatgtttgcccagcagaaggtcacactgccaaaaggtcgtcacaaaattattatc
ctggatgaagctgacagtatgacagatggagctcaacaagccctaaggaggacaatggag
atttactctaaaacaactcgctttgcactggcatgcaacgcttcagacaaaatcatagaa
cctatccagtctcgctgtgctgtcctgcgttatacaaaactcaccgatgctcagatcctt
gcacgactgatgcaggtggttgagaaggagaatgtccggtatacagatgatggactggaa
gctataattttcacagcacaaggagacatgagacaggctttgaacaacttgcagtcaaca
cattcaggatttgggtttgttaacagtgaaaatgttttcaaggtctgtgatgaacctcat
ccacttctggtaaaagagatgattcagcactgtgtcaatgcaaacatcgatgaggcatac
aaggttgttgctcatctctggaagctgggttactcgccagaagacattattggcaacatc
ttccgtgtctgtaaaactttccaaatgcaggaatacttgaagctggagttcataaaggag
attggatacactcatatgagaattgcagaaggggtgaattccttattacaaatggctgga
ctgcttgctcgactttgccaaaagactgcggctccaccagctagttga
DBGET
integrated database retrieval system
