Rhincodon typus (whale shark): 109911332
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Entry
109911332 CDS
T06055
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109911332 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109911332 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109911332 (plat)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
109911332 (plat)
Peptidases and inhibitors [BR:
rtp01002
]
Serine peptidases
Family S1: chymotrypsin family
109911332 (plat)
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
109911332 (plat)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
Nudel
Trypsin_2
EGF_DL_JAG
SPE9_EGF_2nd
Motif
Other DBs
NCBI-GeneID:
109911332
NCBI-ProteinID:
XP_048474654
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All DBs
Position
40:complement(1991074..2010953)
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AA seq
560 aa
AA seq
DB search
MALLRIVTTISLLLTLAVASEHLRFKRGARHFESKTTRGHCMSSAGSVFHLHGDTWLQIE
GRQVQYCRCDQSRIHCHRVPVRDCTRNKCYNGGICRQALYSQHYACECQAGYSGQLCEFD
TKVQCYQDQGTGYRGTWSITRSGAKCLNWNSTAVSRTRYNGRRPDAQQMGLGNHNYCRNP
DNDTVPWCHVYNGHILTWDKCSISACPKHHSSECYAKTGADYRGTRSYSQSGSRCLNWDS
EAVRHKQHNAWVHNAHHLGLGSHSHCRNPDQDFKPWCFIMKGRKVIREYCNIEQCISSGS
CGKREPKAMQYRILGGTTTHITSHPWQAAIFIYHQRSKDYAFLCGGSLIDSCWILTAAHC
LQHSRFKTQEIKVIMGRTIRKEASAADQLLDVEQYFVHKEFDDDTYNHDIALIKLRSKRG
QCAKVTHYVRTVCLPWEKQQLPDWTECEISGYGRQEEYSPFYSNQLKEGNVRLYPSNRCT
SAQLHNRTVTKNMICAGDTRGFDDACKGDSGGPLVCPAKGRMNLYGIISWGIGCGKPGIP
GVYTKVSNYLDWIRKHVDEA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctctattgagaattgtgaccactatatccctgctcctcacccttgctgtggcatct
gaacatttgcgatttaaacggggggcaagacactttgagtctaagactactcgaggacat
tgcatgagctcggctggctcggtttttcacctgcatggcgatacatggctgcagattgag
ggacgacaagtccagtactgccgctgtgaccagtctaggattcactgccacagggtacct
gtacgagattgcacccggaacaagtgctacaatggcggaatatgtcgccaggccctttac
tctcagcactacgcgtgtgagtgccaagctggttacagtggtcagctatgtgagtttgac
accaaagtgcagtgttaccaggatcaaggaactggatatcgaggaacctggagtatcacc
cgctccggggcaaagtgcctgaactggaattcaaccgcagtgtcccgcactcgttacaac
ggccgcaggccagacgcccaacaaatggggcttgggaatcacaactactgcaggaaccct
gacaatgacacagtgccctggtgccatgtctacaatggccacatcctgacctgggacaag
tgcagcatttctgcctgcccaaagcatcacagctccgagtgctacgccaaaactggggca
gattatcgcggaaccagaagttactcgcagtctgggagtcgttgtctcaactgggattct
gaagcagtccgccacaagcaacataatgcatgggtacacaacgctcaccacttggggctg
ggaagccacagtcactgcaggaatccagatcaagatttcaagccttggtgtttcattatg
aaaggaagaaaagtcattcgggaatactgcaacattgagcagtgcatttcatcaggtagc
tgtgggaagagagaacctaaagccatgcagtaccggatcctgggaggaaccaccacccat
attacatcccacccttggcaggctgccattttcatctaccatcagaggtcaaaggattat
gctttcttgtgtggaggaagcctgattgattcctgttggatcctcacagctgctcactgc
ctccagcacagcaggttcaaaacgcaagagatcaaagtgatcatggggagaacaatccga
aaagaggcatccgcggctgaccagctactggacgtggaacagtactttgttcacaaggag
tttgatgacgatacttacaatcatgacattgctctgatcaaacttcgatcaaagcgtggc
caatgtgccaaggtaactcattatgttcgtacagtgtgtttaccatgggagaagcagcaa
ctgcctgattggactgagtgtgagatctctggatatggcagacaagaggagtactctcca
ttctactctaatcaactgaaggaagggaatgtccgtctctacccatcgaaccgttgcact
tcagcccagctgcacaaccggaccgtcaccaaaaacatgatctgcgctggagacactcgg
ggctttgatgatgcctgcaagggagactcaggaggccccttggtctgcccagcgaagggc
cgtatgaatctatatgggattatcagctggggaattggttgcgggaaaccaggaatacca
ggcgtctacaccaaggtctctaactacctggattggattcgcaaacatgtggatgaagcc
tga
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