Rhincodon typus (whale shark): 109911374
Help
Entry
109911374 CDS
T06055
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109911374
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109911374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109911374
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
SR proteins
109911374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109911374
NCBI-ProteinID:
XP_020366256
LinkDB
All DBs
Position
8:67506751..67550251
Genome browser
AA seq
270 aa
AA seq
DB search
MSSRVFIGRLSPHARERDVEKFFKGYGRIKEIDLKNGFGFVEFEDHRDADDAVYELDGKE
LCSERVTVEHARARPRGGRGGRYQGRFSPRRPRSDGRNGPPIRTENRLIVENLSSRVSWQ
DLKDFMRQAGEVTFADAHRHKMNEGVVEFASYSDLKNAVDKLSGAEINGRKIRLIEEPKR
RSRSRSRSRSRTFSRSRSRSRSRSRKSYSRSKSRSRSKSRSRSRSRGPVREQKARSPSPS
KSPASLERPRSRSHSRSRSVSRSPSVASAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacgtgtgttcattggtagactgagccctcatgccagagaaagggatgtggaa
aaattctttaaaggatatggacgaataaaggaaattgacttgaagaatggatttggattt
gtggagtttgaagatcacagggatgcagatgatgcagtttatgaattggatggaaaagaa
ttgtgtagtgaaagagttacagttgaacatgccagagcacggcctagagggggtcgtgga
ggacgctatcaaggtcgctttagcccacgccgcccacggagtgatggaagaaatggacct
ccaattcgtacagagaacagattgattgttgagaatttgtcttcaagagttagttggcag
gatctgaaagatttcatgagacaggctggtgaagttacatttgcagatgctcacaggcac
aaaatgaatgaaggggttgttgaatttgcctcatacagtgatttgaagaatgctgttgat
aaactctctggtgcagagataaatggaagaaagatcagactgattgaggaacctaaacgt
agatctcgcagcagatcccgttcgcgtagccgtacgttttccagatctcgtagtcgatct
cgttccagaagccgcaaatcctacagtaggtccaagagtagaagccgcagcaaatcccgt
tctcgcagtagatctcgtggccctgtcagggaacaaaaagctcgttcaccttcaccatcc
aaatctcctgcttcattggagcgaccaagatctcgttctcactcacgttctcgatcagtc
tcaaggtcaccttctgttgcgagtgctgactaa
DBGET
integrated database retrieval system
