Rhincodon typus (whale shark): 109911429
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Entry
109911429 CDS
T06055
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 3-like
KO
K14942
KH domain-containing, RNA-binding, signal transduction-associated protein 3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109911429
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109911429
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Gene cluster
GFIT
Motif
Pfam:
Qua1
Sam68-YY
KH-I_KHDC4-BBP
KH_1
STAR_dimer
Motif
Other DBs
NCBI-GeneID:
109911429
NCBI-ProteinID:
XP_048452358
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Position
4:96833421..96990994
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AA seq
345 aa
AA seq
DB search
MEDNKYLPELMAEKDSLDPSFIHATRLVTAEITKIEAGEGSDEEKFVDVVSNKNMKLAQK
VLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGESK
YAHLNEDLHVLIEVFAPPSEAYARMGHALEEVKKFLIPDYNDEIRQQQLQELSYLNGTPE
SPETPAVRGKPVRGRGTLAPALSRGRGGVPPPASTVPRAGPVPRGAPPGRGPGARGRGVP
APRARGAPGYRPPPPPVQDTSYGEYAYGDGYGATYEDQGYDSYDNNYSSQGQSASDYYDY
GHGTSQETYESYGQEEWTNSNSRMKAPPARAPKGAYREHPYAPRY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaggataacaagtacttacccgagctgatggccgagaaggacagtctggacccttct
ttcatccatgccaccaggctggtgacagcagaaataaccaaaatagaagcaggggaggga
agcgatgaagagaagtttgtggatgtggtcagtaacaaaaacatgaagttggctcaaaaa
gtattaattcctgtaaagcaattccctaagtttaactttgtcggtaaactgttgggccca
cgtggtaattctttgaagaggttgcaggaagaaacgttgacaaaaatgtccattttaggt
aaaggatccatgcgagacaaagcaaaggaagaagagctaagaaaaagtggagaatcaaaa
tatgcacatcttaatgaagatctgcatgtacttattgaagtatttgctccaccatcagag
gcatatgcaagaatgggacatgctctagaggaagtgaagaagtttctcataccggattac
aatgatgaaattagacaacaacagcttcaagaattgtcctacttaaatggtacaccagag
agtccagaaactccagcagttcgagggaagccagtaagggggcgagggacacttgcgcca
gctctaagcagaggtcgtggtggagttcctcccccagcatccacagttccacgtgcagga
cctgttcccagaggagcgccacctggtcgaggtccgggagctaggggacgtggggttcca
gcaccaagagcaagaggagcaccaggttatagacctccgccacccccagtacaagacaca
tcatatggtgaatatgcatatggtgatggctatggagcaacctatgaagaccaaggttat
gactcttacgataacaactacagcagtcaaggccagagtgcttctgattactatgattat
ggccatggaaccagccaggagacatatgaatcatatggtcaggaagagtggacgaactcc
aactcacggatgaaagctcctccagcaagagcacctaaaggagcatacagggaacacccc
tatgcaccccgatactga
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