Rhincodon typus (whale shark): 109911523
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Entry
109911523 CDS
T06055
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109911523 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109911523 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtp04031
]
109911523 (rhobtb1)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109911523 (rhobtb1)
GTP-binding proteins [BR:
rtp04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
109911523 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
109911523
NCBI-ProteinID:
XP_020366433
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All DBs
Position
20:6214746..6282640
Genome browser
AA seq
699 aa
AA seq
DB search
MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYR
VCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRT
MWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKPNDILPPEKGREVAKE
LGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPP
PVMKVPDNPVSAFKPSHLLDNPLCADVMFVLQNQVKIYAHKVYLATSSSKFYDLFLLDLP
AESWKHNKKNEKPVKLGQDHLMRTLSLDTDDDSSEISVGSTPSILRTSKSDSTLKMNMHE
DESSEEKGAPSGRSLSLWSKAFNHIHEEDLENPVTKRMGLMTVVKMDHSIQPGPFEAVLR
FLYTGELDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIK
ECLAKGTFSDVTLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPNTSKTCM
QAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGE
VLTYLELAQFHNAHQLAAWCLHHICTSYNSVCYKFRKEIKAISPENQEYFEKHRWPPVWY
LKEEDHYQRVKKEREKDEVALHKHHSKRRWCFWHHSAVA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacactgctatggattatgaaaggccgaatgttgaaactatcaagtgtgttgttgtt
ggagacaatgctgttggaaagacacgactcatctgtgcaagagcatgcaataccacctta
acacagtaccagctgctgtccacccacgttcctactgtctgggcaattgaccagtatcga
gtttgtcaagaggtgctggaacgttcccgtgatgttgtagatgaagtaagcatatcactc
aggctgtgggatacatttggtgaccaccataaggaccggcgttttgcatacggcaggtct
gatgtggtggtcctgtgcttctcaattgctaaccccaactcacttaaccatgtgagaaca
atgtggtttcctgaaatcaagcatttttgcccacgaacacctgttgtcttagttggctgt
cagttggatttgcgttacgctgatcttgaggctgtaaatcgtgcacgccgtcccttagca
agaccaataaaacccaatgacattttacctcctgaaaagggccgagaagtagccaaagaa
cttgggattccctattatgaaacaagtgtgtttgatcagtttggcatcaaggatgtattt
gataatgccgtcagaggtgcactgatttctaggcgacatcttcagttctggaaatctcat
ttaaagaaggtgcagaagcctttactgcaggcaccattcctaccacctaaaccgccacct
ccagtaatgaaagttccggataatccagtgagtgcttttaaacctagccatctgctcgac
aatccactgtgtgctgatgttatgtttgtactccagaaccaggttaaaatctatgctcac
aaggtgtacctggctacctcatcatcaaaattttatgacctgtttttgttggatctacct
gctgaatcttggaaacataataagaaaaatgagaaaccagtaaaactcggccaagaccat
ttgatgaggactttaagcctcgacactgatgacgacagtagtgagatcagtgtcggttca
acaccgtccattctgagaacatctaaaagtgatagcactttgaaaatgaatatgcacgag
gatgaatcttcagaagagaagggagcaccatctggaagatcgctgtctttgtggagcaaa
gcctttaaccatattcatgaagaagacctggagaaccctgtaacaaagaggatgggtctc
atgacagtcgttaagatggaccattcaatccagccagggccttttgaagctgtattacgt
tttctgtacacaggagagctggatgaaaatgagaaagatctaatgagaattgcacaaata
gcagaacttttggaagtttttgatttgcgtatgatggttgaaaatattcaaaataaagaa
gcctttatgaatcaggagatcacaaaagcatttcatgtcaggaaagcaaaccgaataaag
gaatgcttagcaaagggaacgttttctgatgtaacgcttaaattagaagatgggagcatt
aatggccacaagtctttgttgatttctagctgtgagtggatggcagctatgtttggaggg
tcttttctggagagctcaaacaaagaggtctactttcccaacacaagcaagacttgcatg
caagcagttctggagtacctgtacaccagccaattctcgttcagttcaaagcttgacccg
attgagctgattgtcttggcaaacaggttgtgccttccacgttttgtggctctgacagaa
caatatgctgtgcaggagttgttgaaatcagtaaaagaaggtgatgatattgatggggaa
gtgttgacatacttggaactggcgcaatttcataacgcacatcaactggcagcttggtgt
ttgcatcacatttgtacaagctacaacagtgtttgctacaagttcaggaaagagataaag
gcaatatctcccgaaaaccaagagtattttgaaaagcaccgttggccacctgtgtggtac
cttaaagaagaggaccattaccaacgagtgaaaaaggagcgtgagaaggatgaggttgct
ttacacaaacatcactcaaaacgtaggtggtgcttctggcaccattctgcagttgcctga
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