Rhincodon typus (whale shark): 109911550
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Entry
109911550 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109911550
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109911550
04081 Hormone signaling
109911550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109911550
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
109911550
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
109911550
NCBI-ProteinID:
XP_048476017
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All DBs
Position
45:complement(8766326..8769588)
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AA seq
328 aa
AA seq
DB search
MHGTPKGLVFALYYPILAAVGVPANLAVIVILSQGKCGLSRCITYYLVSMAVTDLLVIIS
AVILNRIVGIYFPSSFFFITPICSFSFVLIYGIRDCSVWVTVVFTFDRFVAICYQKLKNK
YCTVKTAAVVIGTVCGVSSVKNAFWYFIYEPMHTVKNIPWFCTIKSTFYTSPAWAAFDWI
HRISTPCLPFVLILLFNALTVRHILTTIRTRRRLQVRSNLENQNDPETESRRRSIILLFF
ISGSLILLWLLFLLTFLYVRIAKLSYFSGSNYTESNFVLEESGFMLQLLSSCINPFIYAG
TQSKFRDELRNGMKYPITLSSKLCNFCK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcactccgaaaggtctggtgtttgcactttattaccccatccttgcagcagtc
ggtgttccagctaacttggctgtgattgtgatcctctcccaaggaaagtgtggtctctcg
agatgtatcacttattaccttgtgtccatggccgtgacagatctcctggttattatctcg
gctgtaatattaaaccggattgttgggatttatttcccatctagtttctttttcatcacc
ccaatctgtagctttagttttgtgttaatttatgggattagggactgctcggtctgggta
actgtggtattcacctttgaccggtttgtagctatttgttaccagaagctgaaaaataaa
tactgcactgtgaaaacagcagcagtggtgataggaacagtttgcggcgtgagttctgtc
aaaaatgctttctggtatttcatatatgagcccatgcatacagtgaagaatattccatgg
ttctgtacaatcaagtcgacattttacacctcacctgcgtgggctgcctttgactggatt
caccgcatttcaactccatgtctcccattcgttctgattctactgttcaacgctctgacc
gtccgacacatcttaactacgataaggacccgcaggagactccaggtccggagtaacctt
gagaatcagaatgacccagagactgagagccggaggcgatcaatcattttgctcttcttc
atctcaggcagccttatcctcttgtggctgttgttccttttaactttcctttatgttcga
atagcaaaactcagttatttctcaggttccaattacacagaatccaattttgttctggag
gagagtggattcatgctgcagctactgagctcctgcatcaacccatttatttatgctgga
acacagagcaaattcagggatgagttaaggaatgggatgaaatatccaataacactaagt
tctaaactatgtaacttctgcaaatag
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