Rhincodon typus (whale shark): 109911562
Help
Entry
109911562 CDS
T06055
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
Ank_3
Ank_5
SAM_2
SH3_2
PDZ_6
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
109911562
NCBI-ProteinID:
XP_048466436
LinkDB
All DBs
Position
22:complement(32317569..33204132)
Genome browser
AA seq
1809 aa
AA seq
DB search
MSMVSAQSMPLSPTARKHEEEQQQQNTCNCSEGEDEESISREDTIYHTIRTSTAAKTGHQ
MDNPAPSTVVIRIGVPDLQQTKCMRFNLDAPVWVSKQRILCTLNQTLKDVLNYGLFQPAY
NGRVGKFLDEERLLREYPAPSDTPIPYLEFRYKKRVYTQSHIEEKQLAKLHTKANLKKFM
EYIQYRHAEKISKMLDKGLDPNFHDPDTGECPLTLAAQLENTSEIIKLLKNGGAHLDFRT
RDGLTALHKAVRCRNHTALITLLDLGASPDYKDSRGLTPLYHSSMVGGDPYCCELILHDH
ANVGCMDENGWQEIHQACRYGHVQHLEHLLFYGADMSTQNASGNTALHICALYNQESCAR
VLLFRGANKEIKNYNSQSAFQVAIIAGNFELAEIIKNHKEADVVPFRETPSYTNRRRTGG
GALSSPRTLLRSTSDNNINNLPSRTSHSPVPSLRSLPPQLLAHMQEGAEGGQQSTASSRS
SHSRSPSLQCVQEESDANTPVLRKQTKARLSPSTVSAEPSTSPAAVHRGPKRKLYSAVPG
RTFIVVKPYQPQGEGEILLHRGERVKVLSIGEGGFWEGTVKGRTGWFAAECVEEVQMRQY
NARQETREDRTKRLFRHYTVGSYDNFSSHRVHGIQDKMALCIQKREKESFLYLLVGVKAE
TPIEEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNNVNVVKVGHKQVVSMIRQ
GGNNLLMKVVTVSRKPELEDGMRKKAPPPPKRAPSTTLTLRSKSMTAELEELEKLDEILA
AADRSARTENVAADSRAATVKQRPTSRRITPAEISSLFERQGMPSKSTAPSVPEKPHVSM
HRGMSRTKSIGASEDDKLSVSAMEGRFSRSTSMQDTLREGLGIPPPPQIAPPPPPSSYLL
DTGPPPPFSPPPPPGRTYDNVRSSFKPNTEAKIHGAQQAVTTAEVYEPSRTSVPPVERQK
RARSMIILQDSSYYPVEPTDIPWPSPSPTPQEKSKRKAKMVDNPYANVGQFNVGLFAPTK
PLRKKSPLVKQFQVEDAIERASATGSSAAGKELLARRIAQHSGKEHEQQQRPGTSKAQED
GQDLASPFSAAIAGAVRDREKRLEEKRKSTVFLSVGAIESDTAPNIPALQQSRSVDERLL
SSSDRSVRSPIPSPVPSSRPPASTPVTFIHPLTGKPLDPNSPLALALAARQRALVAETQH
QRTTGSNETVKAQERNVPHSKETKQTEVEGLTSPPFSPEDKAGYSPTSGAPVTAKHQWGT
PTTMRKEVETRPGQPEKAEQEEKKVEERKSMLINIVDTSQQKTAGLLMVHATSNGQESEL
QETPTTALKPSSPQPQLSPTETQTSPTPSTVSEPAPTEAPGKPQTQGSSDEDVEPFAISL
PPLLSSSDEETREELAKIGLVPPPDEFANGIFIQAEAEKTASHPSRPPSAAPTGISPSGK
PSDAPPSEASVDSGVEEIDTRSSSDHHLETTSTISTVSSMSTLSSESGEPLDTYTSFADG
QTFILEKPPVPPKPKLKSQLNKGPVTFRDPLLKQTSDSELVAQHQPSALPPGVGRSRYLI
QRKSKLWGDAVEPRPIQMVEGSKPTVISELSSRLQQLSKDTHSLGDEPSTASLEIGKRSP
VVTARLFSSLGELNTISQRSFGATFTIRPGSRQPVTRRAPSPGKPSVESRTETGISSPRP
SPLSTPTQTPPTILKSSSLNIPHEPKEVRFVMRSASARSRSPSPSGVPMHSLLPPKPFCQ
KPMAMWNKYDVADWLDSLNLSEHRESFLHNEIEGSHLPALTKDDYVELGVTRVGHRMNIE
RALKHFIDS
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggttagcgcacagagcatgcctctcagtccgacagccaggaaacatgaggag
gagcagcaacagcagaacacttgcaactgcagcgagggtgaagacgaggagagtatcagc
cgagaggacaccatctaccacaccatcaggacgagtacagcagctaaaaccgggcaccaa
atggacaaccccgcgcccagcactgtggtcattcgtattggagtccctgacctgcagcag
acgaaatgtatgaggttcaaccttgatgctcccgtgtgggtgtcaaagcaacggattctg
tgcactctcaaccagaccctgaaggatgtcctgaactacgggctgtttcaaccagcgtac
aatgggagggtgggcaagtttctggacgaggaacgtctgctccgagaatacccggcacct
tccgacacccccataccatacctagagttccggtataagaaacgagtgtacacccagagt
catatagaagagaaacaattggccaagctgcacacaaaggcaaatctcaagaagttcatg
gaatacatccagtaccgtcatgctgagaaaatcagtaagatgctggataaaggactggac
cctaacttccatgacccagacacaggagaatgtccactgacgttggctgcacaactggag
aatacatccgagataatcaaattgctgaaaaatgggggggctcatttggacttcaggacc
cgagatggattaacagctttgcacaaggctgtgcgatgtcggaaccacactgcactaatc
accctgttggatttgggtgcttctccagattacaaggacagccgggggttaacgcctttg
taccacagttcgatggtgggaggagacccttattgctgtgaactgattctacatgaccat
gccaatgttggctgcatggatgagaatggctggcaagaaatccatcaggcctgccggtat
ggacatgtgcaacatctggaacacttgctgttttatggagcagacatgagcactcagaat
gcctcagggaacactgctctgcatatctgtgcactctacaatcaggagagctgtgcaagg
gtccttctatttcgaggagcaaacaaagagattaagaattacaacagccagtctgcattc
caggttgccattatagctgggaacttcgaattggccgaaatcatcaagaatcacaaggaa
gccgatgttgtgcctttcagagagaccccaagctacactaacaggcgacgaacaggcgga
ggtgccctctcatccccacgcactctgctgcgatccaccagtgacaacaatatcaacaac
ctcccaagccggacgtcccactcacccgtaccgtccctcagaagcctgccaccgcagtta
ctggcgcacatgcaggagggtgctgagggaggtcagcagagtactgccagctctcggagt
tcacatagccgatcaccctcgctgcagtgtgttcaagaggaaagtgatgctaacacgcct
gtcctcaggaagcagactaaagccaggctcagcccgagcaccgtgagcgccgagccgagc
acaagcccagctgctgtacacagaggacctaagcgcaaactgtacagtgcggttccggga
cggaccttcatcgtggtgaagccctaccagccccagggtgagggtgagatcctgctgcac
cgaggggagcgagttaaagtgctaagcatcggtgagggaggattctgggaaggaacagtg
aaaggtcgaactggctggtttgctgcagaatgtgtggaggaggtgcaaatgagacagtac
aatgcacggcaagaaacacgtgaagaccgaacaaagcgtctcttcaggcattatacagtt
ggatcgtatgataacttttcatctcacagagtccatggaatccaagacaaaatggcactt
tgcatccaaaagagagagaaagagtctttcctgtatcttctagttggagtaaaggcggag
actccaattgaagagttcaccccgacaccagcattcccagcattgcaatacctggaatct
gtggatgtggaaggagtggcatggaaagctggacttaggacgggagatttcctgattgag
gtaaacaatgtcaacgtagtgaaggtcggacacaagcaagtggtttccatgatacgacag
ggagggaataacctgctgatgaaggtggtgacagttagccgaaagccagaactggaggac
ggaatgaggaagaaagccccaccacctccgaagagagcaccaagtaccacactgacactc
cgttccaaatccatgactgctgaactcgaggagctagaaaaattggatgagatccttgca
gcagctgatcggtcagccaggacagagaatgtggcagcagactcccgagctgcgacagtc
aaacagcggcctacaagcaggcgtatcacgccagcagagatcagttcactatttgagcgt
caaggtatgccctcaaagtcaacggcaccatctgtaccagagaaaccacacgtctcaatg
catagaggaatgtcaaggacaaaatctataggagcctctgaggatgataagctgtcagtc
tctgccatggagggaaggttttcacgcagtacatccatgcaagacacacttcgggaagga
ctgggtatacccccaccgcctcagatagcccctcctccaccaccttcctcatacctttta
gatacaggcccaccccctcctttctccccacccccacccccaggacgaacttatgacaat
gtgcgttccagctttaagcccaacactgaagcgaaaattcatggggcacagcaggcagta
acaacagcagaggtctatgagccaagtcgaacttctgtgcctccagtagaaaggcagaaa
agagccaggtcaatgatcatcctgcaggattcatcctactatcctgtagagccaacagac
atcccctggcccagcccatctccaacccctcaagagaaaagcaaacggaaggcaaagatg
gttgacaacccatatgcaaatgtgggccagtttaacgtaggtctttttgcaccaacgaag
ccacttcgtaaaaaaagccctttggtcaagcagtttcaggttgaagacgcaatagagaga
gcatcagccactggctcctctgcagctggcaaagagttattagctaggaggatagcgcaa
cactccggaaaagagcacgagcagcagcagagaccgggaaccagtaaagcacaggaggac
gggcaggatttggccagccctttctctgctgccattgcaggagcagtacgggaccgagaa
aaaaggttggaagagaagaggaaatcaacagtcttcctttctgtaggtgccattgaaagt
gacacagcacccaacatcccagctttgcaacaatccaggtcagttgatgagagactacta
agtagcagtgacaggtctgtccgatcgccaatcccttcacctgtcccctcctcaagacca
ccagcaagcacacctgtaacttttatacatcccctcacagggaagccgctggatcccaac
tcaccattggcacttgcgctggccgcaaggcaacgggcactagttgctgaaacacagcat
cagcggacaactggaagcaatgaaactgtaaaagctcaggagagaaatgttccccacagc
aaagagacaaagcaaacagaggtagagggcctcacatcgcctccattctctccagaggac
aaagcaggttacagtccaacatctggggcaccagtaactgcaaaacaccaatggggaact
cctaccaccatgaggaaagaagtagaaactagaccagggcagccagaaaaagcagagcaa
gaagagaagaaagttgaagaaagaaaaagtatgcttatcaacatagtggatacatcgcaa
caaaaaacagctggcctgctgatggtccatgcaacaagtaatgggcaagaatcagaactt
caagaaactccaacaactgccttgaagccatcatcaccacagcctcaattgtcccctacc
gaaacacaaacttctccaacacccagtactgtttctgagcctgcacctactgaagcacct
ggaaaaccccaaactcaaggaagctctgatgaagatgtggagccattcgccatttccctc
cctccacttctgtcctcaagcgatgaggaaacaagggaggaacttgcaaagattgggctt
gtgccacctcctgatgaattcgcaaatggcatcttcatccaagccgaggctgaaaaaact
gccagccatcccagtagacctccaagtgcagcacctactggcatttcaccctcagggaag
ccttcagatgccccaccttcagaagcaagtgtggactcgggtgtagaagaaatagacaca
agaagcagtagcgatcatcacctggaaaccacgagcacgatttcaactgtctccagcatg
tccacattgtcgtcggaaagcggagagcccttggacacatatacatcatttgctgatgga
cagaccttcatactcgagaagcctccagtgcctccaaagccaaagctaaagtcccaactc
aacaaagggccagtcacattcagggaccctctcttgaagcagacctcagacagtgagctt
gttgcccaacaccagccgtccgcgctgccccccggcgtaggacggtctcgctacctcata
cagagaaagtccaagttgtggggggatgccgttgagcccaggcccattcagatggtcgag
ggcagcaaacccactgtaataagtgagctgagctccaggctgcagcaattgtctaaggat
actcactcactcggggacgaaccgtcaacagcctctctagaaatagggaagaggtcacct
gttgtcactgcacgacttttcagtagtttaggagagctgaacacaatatcccagcggagc
tttggggcgacattcaccatccgtcctggctctaggcaacctgtcacccgccgggccccg
agccccgggaagcccagcgtcgaatcaaggacagaaaccggcatcagctcgccaagaccc
tcgccactctccaccccgacgcagacccccccgaccatcctcaaatcttccagcctcaac
atcccccacgagcccaaggaggtgcggtttgtgatgcggagcgccagtgctcgcagccga
tccccatctccttctggtgtccccatgcattccctgctccctcccaagcccttctgccag
aaacctatggcgatgtggaacaagtacgacgtggcggactggctggacagtctgaaccta
tcagaacacagagagagcttcttacacaatgagatagaaggctcccacctaccagccttg
acaaaagatgactatgtggaacttggagtcacaagagtgggacatcgaatgaacattgaa
cgggctttgaaacattttatagacagctag
DBGET
integrated database retrieval system