Rhincodon typus (whale shark): 109911570
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Entry
109911570 CDS
T06055
Name
(RefSeq) EMILIN-1
KO
K24246
emilin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109911570
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
109911570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
DUF1664
Bacillus_HBL
Apolipoprotein
Hydro_N_hd
DUF1690
ApoLp-III
ATG17_like
Collagen
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
109911570
NCBI-ProteinID:
XP_048457362
LinkDB
All DBs
Position
9:92147273..92369791
Genome browser
AA seq
1027 aa
AA seq
DB search
MNINNGSRCWGTGLISPLVFNRNWCAYVVTRIVSCIIEDGVTTYVKPEYQPCGWGPLQCP
RTVIYRSFMKPRYKLAYKMVTEMEWRCCHGYSGDDCSVGPPGQTDIVSPRPQQPKPSGTR
PSGGSSIEGRMDSDKSHQMEEKIQKLSQEIHNLQSTIRGMNEKFQDEMQKAIEIAMNGRQ
PADAASHPDVKETINEIQKKLHQIDNRVREHDGEINLLNTIKPAGGAGGHSETGQKWSDL
KEELVREVERRVKNSCFSCRADVELLRQQQEEDRQRLRELGRIFNATEQHNRHQIESIHK
HISEMPGSRSSLCCAEIDSIKTKVKDVERKLTSLSDVVGVLNQRLDHQLPGLSSGSSPRN
DQFHKRFQQIERRLNESEKNLEKRIMSHLKNLRHEFSRRIHGNEERVNAVVSVVGNGTVF
DDWVRDTVGGLGEDIAKLKNIVGTDRESLLTVTSSVYDLESKLQRAVNGCAQICSPPHVT
VTHDDQNTSEMLDILTKLQRKIVKNEANIQNIESNIHNLTIGGNSFKNMLHQFGQDIEQL
RTTLHSNVEQMDLISSNLRDLENKVQRAIETSVTECNTMKDEVLLHRNEINVRVNKLTEE
LEKLKEKAGHSEYNCSSICSTTQKELNRLKEELREPAKYYKDLLFKMETFNKTLDRFGMF
GGSLGSDLGSMQGELKDVILTFNSINSTLNVLQDFVHQQSHNTNILNTTFSESTDRLITD
ISRIEEEMTDHIEENNNKFINFQKELDKFNNRMVMEIDECRDSNEGLGQRVSKLETICVK
LDSVSQSLEKIKEGLNRHVSSLWNCQRELNSTLQIHSGMLQNIQDTHLGLLNQKISMLNQ
SMAEIHTTVHNFTIWDFTGIEGPPGLPGPPGPQGPAGEDAFIERISFSAALTTPQLNPGT
ILFDKVLVNDGNHYNPNTGIFTVPYDGRYFISAILTGHRNQRIEAVLAKSNIGLARIDSG
GFQPEGLENRPVLGNQPISASLGIFNIILPLRQGDTVCIDLVTGRLAHSDEPLTVFNGVL
LYDDEDI
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaacattaataatggatccagatgctggggtactgggctgatatctccccttgtattc
aacaggaactggtgtgcctacgtagtgacacggatagtgtcctgcatcattgaggatggt
gtaacaacatacgtcaaaccagaatatcagccctgtggatggggcccgctacaatgccca
cggacagtgatttatcgttccttcatgaagccgcgatacaagcttgcatataaaatggtg
acagaaatggaatggaggtgttgccacggttactcaggagatgactgttcggtgggtcca
ccaggacagactgacattgtatctccaaggccacaacagcccaaaccatctgggacaagg
ccatcagggggctcatcaattgaaggaagaatggattcagataaatctcatcagatggaa
gaaaagatccagaagttgagtcaagaaattcacaatcttcagtccactatcagagggatg
aatgagaaattccaggatgaaatgcagaaagcgattgaaatagcaatgaacgggaggcag
ccagctgatgctgcatcccaccctgacgtgaaggagactatcaatgagattcagaaaaaa
ctccatcagattgataaccgggtaagggagcatgacggtgagattaaccttttaaacaca
atcaaaccagcgggtggtgctggcggtcactctgagactggccagaaatggtcagatcta
aaggaagagctggtgagggaggtggaacgccgggtaaaaaactcctgcttctcctgtcga
gctgacgttgagctcctccgacaacagcaggaggaagacaggcagaggcttcgagaactg
ggcaggatattcaatgccactgagcaacacaataggcatcaaatagaaagcattcataag
cacataagtgagatgcctggatctaggtcaagcctttgctgtgcggaaatagacagcata
aaaacaaaggtgaaggatgtggaacggaagctcacatccctatcggatgtggtaggagtt
ttgaatcagaggttggaccatcagcttcctggcttatcctcaggcagttctccacggaat
gatcagttccacaaacgattccaacagattgaacgaagactgaacgaaagtgagaaaaat
cttgaaaagcgcatcatgtcacatctgaaaaatctgaggcatgaattttcacgcagaatc
catgggaatgaagagagagtcaatgcagtagtgtctgttgtgggcaatggtacagttttt
gatgattgggtgcgagacacagtcggtggtttaggtgaggacattgcaaagttaaagaat
attgtgggaacagatagagaaagcctgttgacagtgacatcaagtgtgtatgacctggaa
tccaagctgcaaagagctgtcaatggctgtgcacagatctgtagccctccccatgtcact
gtcacacatgatgaccaaaatacctctgagatgttggatattttaactaagctccagagg
aagattgtgaaaaatgaggctaacattcaaaacattgagtcgaacattcataaccttact
ataggaggtaattcattcaagaacatgctgcatcagtttggacaggacattgaacaacta
aggacaacgttacattctaatgtggaacaaatggacttaatcagctccaatctccgggac
ttggagaacaaggtacaacgtgcaattgaaaccagtgttacagaatgcaataccatgaaa
gatgaagtccttctgcataggaatgaaattaatgtgcgagttaataaactgaccgaagaa
ttggagaaactgaaggagaaagctggccattctgagtataactgcagctccatttgctca
acaactcagaaagaattaaacaggttaaaagaggagctcagagagcctgccaaatattat
aaagacctgctgtttaaaatggaaaccttcaacaagactctcgataggtttggaatgttt
ggtggcagcttgggctctgaccttggctcaatgcagggagagctgaaagatgtcattcta
accttcaattcaatcaatagcaccttgaatgtccttcaagattttgttcaccagcagagc
cataacacaaatatcttgaacacaactttctctgaaagtaccgataggctgattacagac
atcagcaggattgaggaagagatgactgatcacattgaagaaaataacaataagttcata
aattttcagaaggagttggacaagttcaataaccgtatggtgatggaaatagacgaatgc
agggactctaatgaaggacttggacaacgagtgtccaaactggagaccatctgtgtcaag
ttggattccgtgtcccagagtctagaaaaaatcaaagagggtttaaacagacatgtctcc
agcctgtggaactgtcaaagagaattaaattccacgctgcagatccactctggaatgttg
caaaatattcaggacactcacctaggacttctgaatcaaaaaataagtatgctgaaccag
tctatggctgaaatacacactacagtacacaatttcacaatttgggatttcactggaatt
gaaggaccccctggactgcctggaccacctggaccacaaggtcctgctggtgaagatgcc
ttcattgagcggatttcattctcggcggctctcaccacccctcaactcaatcctgggaca
atcctgtttgacaaggtgttggtgaatgatggaaaccattacaatccaaacacaggtatc
tttaccgtcccatatgatggtcgttatttcattagtgccattttaactggacatcgcaac
cagaggattgaagcagttctcgcaaagtctaacataggactggcaaggattgactcaggg
ggtttccaacccgaagggctggagaacaggcccgtgctgggaaaccaacctatctcagca
tccctgggaattttcaacatcatcttaccactccgccaaggtgacactgtctgtattgat
cttgttacaggcagattggcccattcagatgaaccactgactgtttttaatggggttctt
ttgtatgatgatgaggatatttga
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