Rhincodon typus (whale shark): 109911582
Help
Entry
109911582 CDS
T06055
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109911582 (cfap43)
Cilium and associated proteins [BR:
rtp03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
109911582 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
WD40_Prp19
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_LRRK2
CFAP43_N
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_TEP1_C
HAGH_C
Motif
Other DBs
NCBI-GeneID:
109911582
NCBI-ProteinID:
XP_048464915
LinkDB
All DBs
Position
20:complement(39673714..39747415)
Genome browser
AA seq
1438 aa
AA seq
DB search
MDNADSLSLRWVKGYTTRKVLFVNNNTICYVCGNFLVFMDVDTRQEKVLQCETGSIGVFT
TNSAKSIVAFAEQRLKPFINLYSFPELTKTSVLKDGAELEYTLLEFSYSDFYFATFSSLP
EFNLTIWNWKTNIRLCSESLLGMKPTVLSFNPMNQLQLCLANEECLLLWNIERCDDFHLL
KRIDVKLPAEDGSQAVLEDVGIGPDSSALTYYGPKMLISAQAGLVGNMANTFVPRELQKT
LIKPVSVCWTPNSDLYVGCKTGHLLLVDAELHRAVVFATPSGEQLSPGSFRNASSNIMMS
VHPELKQCAVNTLALNKKGLYTAGLNGILYCIKVTPHKVEIEECLSAGAPIRNIEFSVDY
ESLLVATEEGSIHIYKPSEPNKMTTILDIHSGDYVSAALLGTGKQYCVSARILGAVQVWS
VADGKLISTLVLPVKITVMASCPSSNYVALGTETGQVYFINLAKVETPHLVYQLNLHKMP
IQCLEYDHGGQYLMAGCSDGHMFIVNAKPSKQFKVIGYTEIKSEIMGCSLAFHMSKKIVN
CLILACQARDDKSHGATQLIRLDLPGDLTSGSSISVDHRGMMNDVAIWKQHCQTELPLTS
AVLNTDQHVYGYCTLTRTIYKYKITRGLSSDTFNLITQAKVEGHQLGPGFLYLSANQQCL
ASVARDGFIQLRDANNLGLHFETQCHSYRLGGVKSITLSLDCRTVLTTGIQDGTIVCNTE
RFDPAGSERNKAVLDYNRSMISMLDQSCVTEDKALIVLEQQRESTKDKLDVAADISHLSP
GISTHSTGTYSTPSVSSSKSYQKLDDSRFPESTWLETKMAEAVEKDNRKHMDAKAKLKQG
IKKLRTTVRETIETENLANQYLREVIKKECWDNMAVKGRTLEAFFSGLAVSNYPMRERSN
DELELLKKIMQQRTIELIDLKARKDIVETPPKKEEKEDEEAEDEDSKEEESAALKGSLTC
QYGVVNRHLYKQLELHTKDEKINQIVLLQDVIYNIKTTFNKEFDATYKQKEVEMARVKDR
TVRIVEIMQQLDMDEEVWLPTMSNKELPEREFEVQDSEVTAERYLTPEQKRKLEEEYKAE
QLRLLAAKADNWRERALKDMMGGVLETKKSDILKMEIPVPYFMDKPEYEWTEEQVKQAKE
YAIKEQELNEEKDKYRKTLESELKKLQSSIAESRNNFDDIMNKLFEKKVRTEMIIYQEEL
KICNLVFSLRIEEEIRYRDAQLNYILEEQKDFMAVKSQMTQNMKVMVDRFRESYDDLVAE
DRLLDRGFRREFSDVSAAMVDQLYKLYKRRPKVQTQRIQVATANPFEDQSQLVKDSHASF
LAAMVDLDSLDFKPENLDPAVWDRFCESRRKKIESEHQVKLKAVTLAEMQMFLQRRMEED
ENNAQIINNLIQELNKSVPFYIKYMAVREFLKKGKKSLTTLILVPWHLNQETVHSSAV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcagactctctgtctctcaggtgggtgaaaggttacacaacacgaaaggtg
ctttttgtgaacaataacacaatatgctacgtgtgtgggaactttttggtcttcatggac
gtagacactcggcaggagaaggtgctgcaatgtgagactgggagtattggagttttcacg
accaacagtgccaaaagtattgttgcctttgcagagcagcggttaaagccattcataaat
ctgtacagctttcctgaactgaccaagacttctgtcctcaaggatggggctgagttagag
tatacgcttctggagttcagctactcagacttctactttgctaccttctcctcgctccca
gaattcaatctaaccatctggaactggaaaacaaacattcgtctttgtagtgagtctctt
ctaggcatgaaacctactgttctgagctttaaccccatgaaccagctccagttgtgtctg
gccaatgaggaatgcctgttactgtggaatattgaacgatgtgatgactttcacctatta
aagcgcatagatgtaaagctccctgcagaagacggatctcaagcagttttagaggatgtt
gggattggtcctgacagcagtgctttgacttactatggcccaaagatgttaatatcagcc
caggcaggtcttgtgggaaacatggccaatacatttgtgccacgggaactacagaaaact
ttgattaagcctgtgtctgtctgctggaccccaaattccgatttatatgttggctgtaaa
acaggacaccttttacttgtagatgctgagttgcatagagctgttgtatttgccacacca
tccggtgaacaattgtccccaggcagtttcagaaatgcgtcatccaatattatgatgagt
gtccatccagaactaaagcaatgtgcagtgaacaccctcgcgctcaacaaaaagggactg
tatacagcaggattgaatggaatcctctactgtatcaaggtgacaccccacaaagtggag
attgaggaatgcttgtcagccggagcgccaattaggaacattgaattctcagtagattat
gaatcactgcttgttgctacagaagagggttcaatacatatttacaagccatcagagccg
aacaagatgaccacaatcttagacatacacagtggggactatgtatcagcagctctgctg
gggacagggaaacagtactgtgtgtcagcaagaatactgggtgctgtgcaggtgtggtct
gttgcagatgggaaactcatcagtaccctcgtccttccagtaaagatcacagttatggcg
agctgtccttcctccaactatgttgccctgggcactgaaactggtcaggtctatttcata
aatctggcaaaagtggagacccctcacctggtttaccaactcaatctccacaaaatgccg
atacagtgtttagaatatgaccatgggggtcagtaccttatggctggatgctctgatgga
catatgttcattgtgaatgctaaaccctccaagcagtttaaagtcatcggatatacagag
ataaaaagtgaaattatgggatgttctcttgcatttcacatgtcaaagaaaattgtgaat
tgcctgatactggcatgccaggctagagatgacaaatcacatggagccactcagctgatt
agattggatcttcctggagatctaacttcaggttcttctatatctgttgatcaccgtgga
atgatgaatgatgttgctatttggaaacaacactgtcaaaccgagttgcctctgacctct
gcagtcctgaacaccgaccaacacgtctatgggtactgcactctgacaaggaccatctat
aaatacaagatcaccaggggcctgtccagtgatacatttaacctgatcactcaggctaag
gttgaaggccaccagctaggaccaggattcctctacctctctgcaaatcagcagtgcttg
gcatctgtggccagggatggattcattcagttaagagatgccaacaacctgggattgcac
tttgaaactcagtgtcactcttatcggttgggaggagtcaaatctatcacattgtcattg
gactgtcgaactgttcttacaactggcatccaagatggtaccatagtgtgtaacaccgaa
aggtttgacccagcagggtcagaacggaacaaggcagtgctggattacaatcgctcaatg
atctcaatgctggatcagagctgtgtgaccgaagacaaagccctgatagtgttggaacag
caaagagagagcacaaaggacaagctggatgttgcagcagatatttcccatctctcgcct
ggaatctccacacactccactggcacctacagcacgccaagtgtcagcagctccaagagc
taccaaaagctggatgacagtagattcccagaatcaacttggctggaaacaaagatggca
gaagcagttgaaaaggacaatcgcaagcacatggatgccaaagctaagctaaaacaagga
atcaaaaagcttcgtacaacggttcgtgagacaattgagacggaaaacctagccaaccaa
tacctacgtgaagtgattaaaaaagaatgctgggacaacatggctgtgaaaggacgaacg
ctggaggctttcttttcaggactggcagtgtctaattacccaatgagggagcgcagcaat
gatgagctggagcttctcaaaaagatcatgcaacagagaacaattgaattgattgacctg
aaggctcgaaaagacatcgttgagacaccacctaaaaaagaagagaaggaagatgaggaa
gctgaagatgaagactcaaaagaggaagagagtgcagcattgaaaggcagcctgacctgc
cagtatggtgtggtaaatcgtcacttgtataaacaattagagctgcacacaaaggatgag
aagattaatcagatcgtcctgttacaggatgtaatttacaacataaaaaccactttcaac
aaggagtttgacgcaacctacaaacaaaaagaggtggagatggctcgagtgaaggaccga
actgtgcggattgtggaaatcatgcagcaactggacatggatgaagaggtctggctgccc
acgatgagcaacaaggagttgcctgagcgagagtttgaagtccaggattctgaggttaca
gcagagcgctacctcaccccagagcaaaaacgtaagctggaggaagagtataaagctgaa
cagctacggctactagctgccaaggctgacaactggagggaacgtgcactgaaagacatg
atgggaggtgtcctggaaaccaagaagtcggacattctgaaaatggaaattcctgtaccg
tatttcatggacaaacccgaatatgaatggactgaggagcaggtcaaacaagctaaagaa
tatgccatcaaagagcaggaattaaatgaagagaaggacaagtatcgaaagacactggag
tctgagctgaagaaattacagagttcaattgcagaaagcagaaacaattttgatgatatt
atgaacaaactgtttgaaaaaaaagtgagaacggaaatgatcatctaccaggaggagctg
aagatttgcaatctggtcttctcattgaggatagaggaagagatacgatacagggatgct
caacttaattacatactcgaagagcagaaggatttcatggctgtaaagtctcagatgaca
cagaacatgaaagtgatggtggaccgattccgagagagctatgatgacctggtggctgaa
gacagactcctggatcgtggattcaggagggagttctctgatgtctctgctgcaatggtc
gaccaactttataaattatacaaacgcagacccaaggtacaaacgcaaaggatccaagtg
gcaacagccaacccttttgaggaccaatcgcagttagtcaaagacagccatgccagtttt
ctggctgccatggtggatttagattcgcttgatttcaaacctgagaacctggaccctgcc
gtgtgggatcggttctgtgaaagtaggaggaaaaaaatagagagtgaacatcaggtgaaa
ctgaaggctgtgactctggcagagatgcagatgttccttcaaaggaggatggaggaggat
gaaaataatgcacaaattatcaacaatttgatccaggaactcaacaagtcagtcccattt
tacattaagtatatggcagtcagggaatttctgaaaaagggaaaaaagtcacttaccacc
cttatactggtaccttggcatctcaatcaagagactgtgcattcaagcgcagtctga
DBGET
integrated database retrieval system
