Rhincodon typus (whale shark): 109911692 Help Entry 109911692         CDS       T06055                                  Symbol stab1 Name (RefSeq) stabilin-1   KO K19020   stabilin-1 Organism rtp  Rhincodon typus (whale shark) Pathway rtp04148   Efferocytosis Brite KEGG Orthology (KO) [BR:rtp00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     109911692 (stab1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:rtp00536]     109911692 (stab1) Glycosaminoglycan binding proteins [BR:rtp00536]  Hyaluronan   Cell surface receptors    109911692 (stab1) SSDB OrthologParalogGFIT Motif Pfam:  Fasciclin EGF_3 Xlink EGF_STAB1-2 cEGF EGF_ATRAID_C EGF_Teneurin FXa_inhibition RIPR_EGF-like_7th EGF_MSP1_1 EGF Motif Other DBs NCBI-GeneID:  109911692 NCBI-ProteinID:  XP_048462665 LinkDB All DBs Position 16:complement(17540844..17757051) Genome browser AA seq 2501 aa AA seqDB search MIAEQGEARRENNEKKARRSELTNAEAMESVSLWRFAALGLLLLLTQCPQSITAQNGKKR QKCNEQIKLTTATACTSCAISQNLLCPRGFQKITQDFGIRDCSFTVDLGGEQLIRQVGCR HLCTKMATVFECCAGFWSQDCLECPGGSTNPCNGHGTCLDGVSGNGTCICEPKYKGSACE ECADEEAYGPDCVLGCRCVHGICSNGITGNGKCTCFSGYTGPQCDQEAPDCKSLQCGNNT QCVEETVGKFTCKCLPGFLESERACKAIDPCTANICDKNAVCQYHGEGKYKCTCHLGYHG NGKICLPVNPCSIDNGGCPENSTLCVYEGPGKSSCKCKDGFVATNSSQGCILKDVCKPSL CNKTAKCVTVSPGNFECACKPDEIGDGRKCIGPMREVIQKLITNQYSTASLAMFDNGCTS TLSNMGPFTVFLPLVKKLKNNQVIDTSKFSCKQHIVPGVLLLEDFKNITTFETLTGDTVE VIQARKYFQLIFQNKRYNIMRGNKAASNGIIHTIDRFLSGNIENLGDPQKTVADILAAGQ LFSRFETILENCDLPFILDGPGPYTVFVPSNDAVDKMRDGTLFYMFGEGRPKLQELVKHH IFASGNLPADRLSTMPRILTKANQIITINVTVNGQILLGDKGVPLHKRDIIASNGIIHTL DGILIPPSILPILPKRCDEIRYRIITAPCGDCSSLNESHCPEGSTPMETYVQNCVYDKSI DDVIYSRNSGCARHCNQTIVKPGCCKGFFGPDCKPCLGGFKNPCYGHGQCIDGLEGDGSC KCYSSFKGIACHICSGYNKHGENCDQDCPCLHGICDNRPENGGICQPGTCEEGFTGIFCD KKTESCGPSGLSQFCHAFAVCEYDNGTARCVCKNGYEGDGISCQVEDLCKKPDRGGCAEN AECFSLGPGNITCQCNTGWTGDGRVCAEINECLLNTRGGCDDNADCQYIGPAQSRCTCKR GFAGDGKKCTLINPCLEENGGCHVMAECEPTENGNRKCTCFKDYAGDGIKCFGDILTELA SSAYFSGFNSWLKKSLHSMEFPAGANMTVLVPSETAINNMDKAAIESWEQTDRLLSIVKS HFIMGGLAVDDLKEYEGQNLPTMNILTRLLIKNENGNLTIGGARIVIRNIPAVNGYIHII DKILFPSSEDLPPLLPSLLDLLERLPQYSHFKQLLQHYHLIDEIESSEQYTILMPEDASI EEYYRVQDSEQLDVSSVQYHIILGEKFQYDKIKDGIHRGTMMGSSYQVIFYLKQDKIFVN DIALNGFHNETRNGILLGTTQVLQIQKNRCDTNNTVTVEGVCGSCDDNPICPQGTTPMEF AGDVRTHTCFYKEFRNGKGVELSGCKPSCVKVTITLKCCFGYFGSKCQMCPGKPDAWCSN FGICQDGVNGTGECLCREGFQGTACESCEAGRYGPHCELECLCVNGKCNDGLDGDGTCNC FKGWRGINCDVGIVNDYCNGTCHPNANCLLGSPDSLASCICSAGYTGNGTYCSEINLCEV NNGGCSVHSNCTNVSAGERTCTCHDGYTGDGLICLEIDGCKEGNGGCHEKAECTKTGPNR VACNCFPGYSGDGRNSCVPINPCEKNNGDCGPFASCEATGPGIRKCTCRRNYIKVGLSCR GKISQELVRESDAALFYKYLQENDIKELNGKGPFTVFVPRPDTLTQDNTMEEWKTRGLIG DLLRYHIVGCGKLHYDDLRKQSSLIALSGNAIQVSWKQNAIYLNGDAQIISSDYIATNGI VHYINKILVPYNLTSINRLVTLPLHNISTVANANGYKIFSTLIKETNLLPLLEDPIHRPF TMFWPMDEAFNSLPKERQDWLYSIENRHNLVAYLKFHMIRDSKTLAADLPLISSRRTMRG SVISVRCSRTIIGHLIVNDGSAQIVQRHLEFDGGIAYGINNILEPPHIGARCDALTMHHA RGPCGSCLNPPACPLGTKPQDGSDYQSCWYNQANRPGRHLREQFGDRLNTVVFPYKLIRG KWIRQGHLHATRGCSRQCVNPLWIPQCCKNHYGPYCQVCPGGIQSPCSSHGSCNDRRLGN GMCQCSVGFSGTACELCEARRYGPNCKKCNCTENAICDEGISGAGTCFCKEGWTGKYCET RFAVKSACFPKCDRNAVCRSDNICECNPYYEGDGRKCTVVDRCKTNNGGCHQYAACSQSG INITCTCQPEHEGDGYICSPIDRCVDGRNGGCSEHAICINIGPNKRRCECKEGFRGDGIQ CLVNAKPPVDRCLERNLCHSHAFCNDLHFQDKTAGVFHLQSPTGKYRFTFEGAIAACNAE GATLASFDQLATAQQFGYHLCVIGWMADKKAGYPTTHINPNCGSNKIGIMDYGVQTNLSA LWDAYCFREQDIQCVCKEGFVGDGYSCNGNLVDVLSSNSNFSVFYSKLLDYANATEEGMK FLEFLSDETTNETLFVPLDSGFGVNETLPWRDLENHISRNNSFIYYDELSADTLISSRLG YDLLIDETGSANQTLFSVSDSRAFLLKSQHLLPLNLKNVIY NT seq 7506 nt NT seq  +upstreamnt  +downstreamnt atgatcgccgagcaaggagaagcaagaagggagaacaacgaaaaaaaagctcgccgatct gagctgacgaatgctgaagcaatggaaagtgtcagtttgtggcgttttgcagcgctgggg ctgttactgttgctcactcagtgccctcagtctataacagcccagaacggaaagaaacgt caaaaatgcaatgaacagataaagctgacaacagccacggcctgtacctcctgtgcaata agccaaaatctcttgtgtcctcgaggcttccagaagatcactcaagacttcgggatcaga gactgcagttttactgtggatctgggtggagaacagctgattcgacaagttggttgcaga cacctgtgcacaaaaatggccacagtattcgaatgttgtgcaggattctggagtcaggac tgcctagaatgccctggtgggtcaacaaacccttgcaatggacatggtacatgtttagat ggagtttcagggaatggaacctgcatttgtgagccaaagtacaaaggaagtgcctgtgag gagtgtgcagatgaggaagcttacggccctgattgtgttttgggatgcaggtgtgtacat ggaatctgcagcaatgggatcactggaaatggaaagtgcacttgcttttctggttacact gggccacaatgtgatcaagaggcccctgattgcaagtcactgcaatgtggaaataacaca cagtgtgttgaagaaacagtagggaaattcacctgcaagtgtctgcctggttttctggag tccgaaagggcctgtaaggcaatagatccatgtactgcaaacatctgtgacaagaatgca gtctgccaataccatggagaaggaaaatataaatgtacctgtcatcttggctaccatgga aatggaaagatttgtttaccagtcaatccttgtagtatagataatggtgggtgtccagaa aattctactttgtgcgtctatgagggaccagggaagtcttcttgcaaatgcaaagatgga tttgtcgccacaaattcttcacagggttgcatcttgaaagatgtctgcaagccgtcgctc tgtaataagacagcgaagtgtgtaactgtgtcacctggaaattttgagtgtgcctgtaaa ccagatgagattggagatggccgtaaatgcattggtcccatgagggaggtgatccaaaag cttatcactaaccagtacagcactgcatcacttgcaatgtttgataatggatgtacatca acattgagtaacatgggaccttttacagtctttcttcctctagtcaagaaactgaaaaac aaccaggtaattgatacaagcaaattttcatgcaagcagcacattgtacctggtgtttta ctactcgaggactttaaaaatattacaacctttgaaacattgactggtgatacggttgaa gtgatccaggcaagaaagtactttcagcttatatttcaaaataaaaggtacaacatcatg aggggcaacaaagcagcatcgaatggaatcattcacacgattgaccggtttttatctgga aacattgaaaatctcggggatccacagaaaactgttgctgatattcttgctgcaggacag ctgtttagtaggtttgaaaccattcttgagaattgtgatctccctttcattttggatggc cctggtccttacacagtctttgtgccgagtaatgatgcagtggacaagatgagagatgga acattattctatatgtttggtgagggtcggccaaaacttcaagagcttgtgaaacatcat atctttgcatctggcaatttgccagcagacagattatcaactatgcctcgaatcttgaca aaggcaaaccagataataaccatcaatgttaccgttaacggccagattttgttgggtgac aagggtgttcctttacataaaagagatattattgcttcaaatggcatcattcacactttg gatggcatccttattcctccttcaattcttcccatcttgccaaaaagatgtgatgaaatt cgctatcgcataataacggctccttgtggagactgttcctcattgaatgagagccattgc ccagagggaagcacaccaatggaaacatatgtacaaaattgtgtgtacgataagtcaatt gatgatgttatctacagtcggaactctggttgtgctagacactgcaaccagaccattgtt aaaccaggatgctgtaaggggttctttggtcctgattgcaagccttgcttaggtggtttt aaaaatccatgttatggacacggacaatgcattgatggcttagaaggagatggttcatgc aagtgctattcaagttttaaaggaattgcctgtcacatttgttctggttataataaacat ggagaaaactgtgaccaagattgcccttgtttgcatgggatttgtgataacagacctgaa aatggagggatttgtcagcctggtacttgtgaagagggttttacaggtatattctgtgac aagaagacagagtcttgtggcccaagtggattatcccaattttgtcatgcatttgctgtg tgcgaatatgacaatggcactgccagatgcgtatgtaagaatggctacgagggtgatggg atttcctgtcaagtagaggatctttgcaaaaagcctgaccgcggaggatgtgctgagaat gcagagtgtttcagtctgggtcctgggaatataacctgccaatgcaacactggatggact ggagatgggagagtctgtgctgaaataaatgaatgcttattgaacacccgaggaggttgt gatgacaatgctgactgtcagtatattggacctgcacagagtcgctgtacgtgtaagaga ggatttgctggtgatggcaagaagtgtaccctcattaatccatgcctggaagagaatggt ggatgccatgtaatggctgaatgcgaacctactgagaatggaaatcgcaagtgtacctgc tttaaagactatgctggagatgggattaaatgctttggggacatactaacagagctggca tcaagtgcctacttttcaggattcaatagctggctcaagaagtccttgcatagtatggaa ttcccagcaggagctaatatgactgttctcgtgccatcagagactgccataaacaatatg gataaggctgccattgaatcttgggaacagacagacagactactgtccatagtcaagtca cattttattatgggtgggcttgctgttgatgatttaaaggaatatgaaggacagaactta ccaacaatgaacatattaaccaggttattaatcaagaatgaaaatgggaatctgacgatc ggtggggcaagaattgtcattcgcaatatccccgcagtaaatggatacattcatatcatt gataagattttgttcccttcttcagaagatttaccaccacttctgcctagcttgcttgat cttctagaacgactgcctcagtactctcatttcaaacaattattgcagcactaccatcta attgatgagatagagtcatccgaacagtacactatactaatgccagaagacgcatcaatt gaagagtactacagagttcaggatagtgaacaactggatgtcagttctgtgcagtatcac attattcttggggagaagttccaatatgataaaattaaggacggaattcatcgaggaact atgatgggatcatcctatcaagtaatattttaccttaagcaagataagatttttgtaaat gacattgcattaaatggttttcacaatgagacaagaaatggaatcttactgggaacaact caagttcttcaaatacagaagaatagatgtgacaccaataacactgtaactgtagaggga gtatgtggcagctgcgatgataatcccatctgtcctcaagggacaaccccaatggagttt gctggtgatgttcgaacacacacctgcttttataaagagtttcgaaatggcaaaggtgtg gaactttctggctgcaagcccagctgtgttaaagtaaccataactttaaaatgctgtttt ggatactttggatcaaagtgtcagatgtgccctgggaagccagatgcttggtgctccaat tttggcatttgtcaggatggcgtcaatggaactggagagtgtctgtgtcgtgaaggattt caagggactgcctgtgaatcttgtgaggctggtagatatgggccacattgtgaactggaa tgcctgtgtgtaaatgggaagtgtaatgatggacttgatggtgatggaacttgtaactgc ttcaaaggctggagaggcatcaattgtgatgttggaattgtaaatgattactgcaatggc acttgccatcccaatgctaattgccttctaggatcacctgactctctggcctcctgcatc tgttctgctggctacactggaaatggaacatactgctcagaaatcaacctctgtgaggtt aataatggtggctgttcagtgcactccaactgcaccaatgtttctgcaggagagagaaca tgcacttgtcatgatggttacactggtgatgggctaatctgtttagaaattgatggttgt aaagaaggaaatgggggttgtcatgagaaagcagagtgcaccaaaacaggaccaaatcgg gtcgcctgtaattgtttccctggatactctggagatggcagaaattcctgtgtacccatc aacccttgtgaaaagaacaatggagactgtggaccatttgccagctgcgaagcaacaggg ccaggaattcgaaaatgtacctgcaggaggaactacattaaggttggactttcttgtcga ggcaaaatttcacaggaacttgtccgggaatcagatgctgcattgttttacaaatatctt caggaaaatgatatcaaagaacttaatggtaaaggaccattcactgtgtttgtgccaaga cctgacacacttactcaggataacacgatggaagaatggaaaacacgtggtttgattgga gatttacttcgatatcacatagtaggctgtgggaaacttcactacgatgatctaaggaaa cagagttccctcattgctttatctggaaatgccattcaggtctcctggaaacagaatgca atttacttgaatggagatgcacagatcatcagttctgattacattgcaacaaatggaatt gtccattacatcaacaagatcctagttccatacaacttaacgtccatcaaccgattagtc acactacctctgcacaacatcagcacagttgcaaatgctaatggatacaagatttttagt actttgatcaaggaaacaaatctgctacctctactggaagatccaatccacagaccattc accatgttctggccaatggatgaagcttttaattctctacctaaggagaggcaagattgg ctttatagtattgaaaacagacacaaccttgtggcgtacttaaaatttcacatgatcagg gattcaaagactttagcagcagaccttccactcattagcagcaggaggaccatgcgagga tcagttatttcagtccgctgcagcagaactataattggacatctgattgtgaatgatgga agtgctcagattgttcagagacacctggaatttgatggtgggattgcatatggcatcaac aatatcttggaacctccacatataggagctcgatgtgacgcacttacgatgcaccatgcc cgtggtccctgtggtagttgtttgaatcctcctgcctgtcctcttggaacaaaaccacag gatggttctgattaccaaagctgttggtacaaccaagcgaacagaccaggcagacacctt cgggagcagtttggtgatcggctgaatactgttgtatttccctataaactgattagagga aaatggattcgtcaaggtcacctccatgcaacacgtggctgcagcagacaatgtgttaat cccctttggattccccagtgttgcaaaaatcattatgggccttactgtcaagtgtgtcct ggaggaatacagtcaccttgtagttctcatggaagttgtaatgatagaagactcggaaat ggaatgtgccagtgctcagtgggcttcagtggaacagcctgtgaattgtgtgaagctcgt agatatggaccaaactgcaaaaaatgtaattgcacagaaaatgcaatctgtgatgaagga atttctggtgctggaacctgtttctgtaaagagggatggactggaaaatactgtgaaaca agatttgctgtaaaatctgcatgtttcccaaagtgtgatcgcaatgctgtttgcagaagt gacaacatctgtgagtgtaatccatactatgaaggtgacggaagaaaatgtacagtggtt gaccgctgcaagaccaataatggaggctgccatcaatatgctgcctgtagtcaaagtggg attaacataacctgtacttgccaaccagagcacgagggtgatggctatatctgcagcccc attgaccgatgtgtcgatggcaggaatggtggatgcagcgagcatgcaatatgcatcaat attggaccaaacaaacggaggtgtgaatgcaaagaaggattcagaggtgacggtatccaa tgtttagtaaatgccaaaccaccagtagatcgttgtcttgaaaggaatctatgtcattct catgccttttgcaatgatctccatttccaagataaaacagctggagtattccatttgcag tcacccactgggaagtatagatttacctttgaaggtgcaatagctgcctgcaacgctgag ggggctactctggcaagttttgatcaacttgctactgcccaacagtttggttaccacctt tgtgttattggatggatggctgataagaaagcaggatatcccacaacccacataaatcct aactgtggctctaacaagattggtataatggattatggagtgcaaacaaatctcagtgcg ctttgggacgcttactgctttagagagcaagatattcagtgtgtatgtaaggaaggcttt gtgggtgatggttattcctgcaatgggaaccttgtggatgtgctctccagtaactccaat ttttcagtcttttattctaaattgttagattatgccaatgccactgaagaaggaatgaaa ttcctggaattcctatcagatgagacaaccaatgaaactttgttcgtgcccttagattct ggttttggagtaaatgagaccttgccatggagggatcttgaaaaccatatctccaggaac aatagttttatctactatgatgagttgagtgctgatacactcatttcatccaggctggga tatgatcttctcattgatgaaactggatctgcaaatcagaccctcttcagtgtaagtgat agtagagcttttctattgaaaagtcaacacctgctgcctttaaatttgaaaaatgtcata tattaa

DBGET integrated database retrieval system