Rhincodon typus (whale shark): 109911791
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Entry
109911791 CDS
T06055
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
109911791
NCBI-ProteinID:
XP_020366761
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All DBs
Position
3:complement(66748687..66870114)
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AA seq
922 aa
AA seq
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MDTPEYLDLDAIDFSDDVTFGSSSAKALPELYKRSDMQNEGRIVSSSNWPSGGTSSISSG
IKAKGTADVYSKFRPVKRVSPLKHQPESPENDRDTEQHKLKGNYKKQDDTENPSEPNTLC
YNNGQLFKIKDTGTSILLGELEHYDLDMDEILDVPYIKVNHFPSQRCSPFTKVASEKRPG
MEMRDDGNRICSAVKHENSPTNVTQFCILSPVNSLELRKAKPVVTKPHRHATDSIEGSES
PDGCDAIHNAEAEGKDLSSRTSSLFVNSHGHKISGTMQNSRPKTLSLQTPTESKLEEGNA
NKNGISMGRPGETSEEAKNVKSILNIVREGQISLLPHLTVDNLEKIHDEKGNNLLHIAAS
QGHLECLQHLTTLMAEECLTERNNEKLTPSSLAVKEGQLECLRWLMSETEAIAELSPSDG
YPALVHYAACYGQEKVLLWLLQYMQEQGISLDEVDQYGNTAAHVATQHGHLSCLQTLVEY
GANVTIQNQDGEKPSQSAERHGHTTCSRYLVVVETCMSLASQVVKLTKQLKEQTAKQISL
QNQLQHFLQDQMTEGAEPQSPSSSVPSENDKKTHSSCGQRMPGISTNGNAATYNSETKSK
VTKKGVLKQKGEEADKILRQLLGEEISGNVCTQEKLSLEFQDQQEASVVTGSARKVLRNK
RELKLTRLRYSQRSSSESDTDSYISEDQKNSPIRRADKPRPEPIVEKDEYTAKVHFMIKK
HASAVGRMFPFSLKASGSSDEQSHSPIAESNDNVPDSQHQIRSPVRTQSAEESVLPCADN
TTTQKTTNSPKSALKSPSSKSRTSQNLKLRVTFEEPVVEIEQTVPELDNRKGTESEGTLP
RSAPSLEMGEPLNRYMGQFHSPVESINSNQNNNNSQATHLNMTSTPNLPLNSTGRKSGGS
KASCVTPTKVNAKTLSVLKSTK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatactcctgagtatttggatttggatgcgatagattttagtgatgatgttactttt
ggaagctcttcagcaaaagccctccctgaattatacaagagatctgatatgcaaaatgaa
ggccgaatagtttctagttcaaactggccttcgggaggtacatcatcaatcagcagtgga
ataaaagcgaaaggtacagccgatgtgtacagtaaattcagacctgtgaaaagagtttca
cctctcaagcaccaaccagaaagccctgaaaatgatagagatactgaacagcataaactc
aagggtaactataaaaagcaagatgatactgaaaatccaagtgaacctaataccttgtgt
tacaacaatggacagttatttaaaatcaaagacactggcactagcattttgcttggtgaa
cttgaacattatgatttggatatggatgaaattttggatgtgccttatattaaagtaaac
cactttccttcccaaagatgtagtcctttcacaaaggttgcctcagagaaaaggccaggc
atggaaatgagagacgatggcaacaggatttgctcagcagtgaagcatgagaattcacca
accaacgtaacgcaattttgtattctgtcaccagtaaatagtttggagttgaggaaagca
aaaccagttgtcacaaaacctcataggcatgcaactgacagcatagagggctccgaatca
ccagatggctgtgatgcaatacataatgctgaagctgagggtaaagatttgagtagcaga
acttcaagcttgtttgttaattcacatggacataagattagcggtactatgcaaaactct
cgtccaaagacattgtctctgcaaaccccaactgagagtaaactagaagaaggaaatgct
aataaaaatgggattagcatgggaagacctggagagacaagtgaggaagcaaaaaacgtc
aaaagtattttaaacatagtcagagaaggacagatttcgttgctgccacatttaactgtt
gacaatctggagaagattcatgatgaaaaaggaaataatctactgcacattgcagcctct
caaggacacctagagtgtttacaacatctgacgactttaatggcagaggaatgcttgaca
gagcgtaataatgagaaacttaccccatcttccttggcagtaaaggaagggcagcttgaa
tgtctgcgttggctgatgagtgaaaccgaagccattgctgagttgagcccttcagatggt
taccctgctcttgtacattatgctgcatgctatggacaggaaaaagttcttctgtggctt
ctacaatatatgcaggaacaaggaatatctttggatgaagttgatcagtatggaaacact
gcagctcatgttgctacccaacatggtcacctgagctgccttcagaccttagtcgaatat
ggagcaaatgtgacaatacagaatcaggatggagagaagccttcccagagtgcagagcga
catggacataccacttgttcacgttaccttgtggttgtggaaacctgtatgtctctagca
tcacaagtggtgaaattaacaaaacaactaaaagaacaaacagcaaagcagatcagcttg
caaaatcaacttcagcatttcctacaagaccagatgacagaaggagctgaaccccaatct
cctagttcctctgtaccatccgaaaatgataagaaaactcattcatcctgtggtcaaagg
atgcctggcataagtacaaacgggaatgcagctacttacaacagtgaaacaaaatcaaag
gttaccaaaaagggggtactgaaacagaaaggtgaagaagcagacaaaattctgcgtcag
ctcttgggcgaagaaatttctggaaatgtgtgcacacaggaaaaactttctttggagttt
caagatcagcaggaggcaagtgttgtaacagggtctgcaaggaaagttctgagaaataaa
agggaactgaaattgaccagactgagatattctcagagatcctccagtgagtcagacact
gactcctatatcagtgaagatcagaagaactctcccattagaagagctgacaaaccacga
ccagagcccattgttgaaaaagatgaatacactgcaaaagtccacttcatgattaaaaag
catgcctcagcagttgggagaatgtttcccttttcccttaaagcctctggttcatcagat
gaacagagtcattctcctattgctgaaagcaatgataatgtacctgactctcagcatcag
ataagaagtccagtcaggacccagtctgctgaagaatcagttctgccttgtgctgacaat
actaccacacaaaaaaccacaaacagtcctaaaagtgctctgaagtcaccatcttcaaag
agtagaacgtctcagaatttaaaacttagagtgacttttgaggagcctgttgtggaaatt
gaacagacagttcctgaattagataacaggaagggcacagaaagtgaaggaacgttacca
aggtcggcacctagtttagaaatgggtgaaccattgaacagatacatgggacagtttcac
tcaccagtggaatctataaacagtaaccagaacaacaataattcacaagctacccattta
aacatgacatccacccctaatttaccactgaattccacaggaaggaaatcaggagggtca
aaagcaagttgtgtaactcccacaaaagttaatgccaagacactgagtgtgttaaaatcc
accaaataa
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