Rhincodon typus (whale shark): 109911829
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Entry
109911829 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109911829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109911829
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
109911829
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
109911829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
zf-C3HC4_4
zf-RING_14
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
109911829
NCBI-ProteinID:
XP_048477454
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MTLAICFLISCFLQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDD
NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQ
FCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC
RNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYM
NHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYL
RKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQH
VHEGYEKDLWEYIED
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacactggcaatctgttttttaatttcttgctttttgcagtacttcacaggcttagag
tgtggtcacaaattctgtatgcagtgctggaatgaatacttaactacaaagatcatagaa
gaaggtatgggacagactatatcatgcccagctcatggctgtgatatcctggttgatgac
aacacagttatgcgtttgatcacagattccaaagtcaagttgaagtaccagcatttaata
accaacagttttgtagagtgcaatcgactgttaaaatggtgccctgctcctgactgtcac
catgttattaaagtccagtatcctgatgcaaaaccagttcgctgtaagtgtgggcggcag
ttctgcttcaactgtgctgagaattggcatgatcctgttaaatgcaagtggttgaagaag
tggattaagaagtgtgatgatgacagtgaaacttccaattggattgcagcaaacactaag
gaatgtccgaaatgccatgtgaccattgaaaaggatggtgggtgcaatcacatggtttgt
cgcaatcagaattgtaaagcggaattctgttgggtctgccttggaccctgggagccacat
ggatctgcctggtataactgcaaccgttacaacgaagatgacgcaaaggctgccagggat
gcccaggagcgttctcgagcggcactccagcggtacctattctactgcaaccgttacatg
aaccacatgcagagcctgcggtttgagcacaagctgtacgctcaggtcaagcagaagatg
gaggaaatgcagcaacacaatatgtcttggattgaggtgcagttcctgaagaaagctgtg
gatgtgctctgtcagtgtcgcgccacgttaatgtacacatacgtctttgctttctacctc
agaaagaacaaccagtccattatctttgagaacaatcaggcagatctggagaatgcaaca
gaagtgctgtctggctatctggagagggacatatcccaggattccctgcaggacatcaaa
cagaaagtacaagacaagtacagatactgtgagagccggaggaaggtgttgctacagcat
gtgcacgaaggctatgagaaagacctttgggagtatatcgaggactga
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