Rhincodon typus (whale shark): 109911947
Help
Entry
109911947 CDS
T06055
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109911947 (taf1a)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109911947 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
109911947
NCBI-ProteinID:
XP_020366910
LinkDB
All DBs
Position
9:48843978..48876118
Genome browser
AA seq
453 aa
AA seq
DB search
MDDVIAELIAERDHSTDDGPVQTSSSRPEICLHLPTSILQFQTIKDAKQTGFRRTVQTCL
SRIQKAMLHHQWQTAAELMTNYFQILEDNTSRKQASASKFIWMMGTAILQYHPNSCIEDV
SSFARKMKSIGVKHYLKMCLEHAFHLLCNGTMEEAYRELSLAETWRYGEKSPAQQKALKL
IQGYRSLLDYYTWAKKNSALQEQVDAEVDSGRAQEMHNYFRQASIGLHDAVENPGVWDPF
ILSYVNLLDFYDGFEEALTVLNNYAYNSRFPPNPNAHVYLYEFLKKHNTSAKKLIKVLRI
LHQLVPSHEVMLEFNSLLLQSKKKKHCREALGVLFSLLDFSTWKENCHVWKCLIKQMKKV
IAEGHCDWIHEQWASRQDWWPPYHFSKYRAHKDFEENEGYACRKAMIAGILMGKGCKYFV
TIYQLGSKIQGAKLKKMRHYVKNHSLRSICLTV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtgattgctgagctaatagcagaaagagaccattcaactgatgatggacct
gttcagaccagcagttcccgcccagaaatctgtttacacctgcctacgagtatacttcag
ttccaaacgatcaaagatgcgaaacaaactggtttccgaaggacagtccaaacctgtttg
agtcgcattcagaaggccatgcttcatcaccagtggcagactgctgcagaactgatgaca
aactacttccagatcttagaagacaacacctccagaaagcaggcatctgctagtaagttc
atttggatgatggggactgcaatacttcagtatcatcctaacagctgcattgaggacgtc
agttcatttgccaggaaaatgaagagtataggagtgaaacattacctgaagatgtgcttg
gaacatgcttttcacctgctgtgcaatggaacgatggaggaagcctacagggaattgtct
ttagctgaaacatggagatatggtgaaaaatctccagctcagcaaaaagcgcttaaactt
attcagggatataggtcattgcttgactattatacatgggctaaaaagaatagtgctctt
caagagcaagttgatgctgaagttgattcgggcagagcgcaagagatgcacaattatttt
cgacaagcttctattggtctgcatgatgctgtagaaaatcctggtgtttgggatcccttt
atactgagctatgtaaatctccttgatttctatgatggttttgaagaagcactgactgtg
ttaaataattatgcttataatagcagatttccaccaaacccaaatgctcatgtgtacttg
tacgagttcctgaaaaaacacaacacctcggctaaaaaactgataaaagtactgaggatc
ttgcatcagctggttccttcccatgaagtgatgttagaatttaactcgctccttctgcaa
tcaaaaaaaaagaagcattgtagggaagcactgggtgtcctcttcagccttctggatttt
tctacatggaaagaaaactgccacgtatggaaatgtttaataaaacagatgaagaaagtt
atagcagagggccactgtgactggatccatgagcaatgggcgtcgagacaagattggtgg
cctccgtatcatttcagcaaatatcgagcgcacaaggattttgaagaaaatgagggctat
gcttgtaggaaagcaatgattgcgggaatcctaatggggaaaggctgcaaatactttgtc
accatttaccaactgggaagcaaaattcagggagcaaaactgaagaagatgagacattat
gtaaagaatcacagtctgcgcagtatatgtttgaccgtgtga
DBGET
integrated database retrieval system
