Rhincodon typus (whale shark): 109911966
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Entry
109911966 CDS
T06055
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109911966 (ptbp2b)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109911966 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109911966
NCBI-ProteinID:
XP_048457883
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All DBs
Position
10:complement(62332884..62418709)
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AA seq
551 aa
AA seq
DB search
MMPSSYSILTDVTVGLKRGSDELSGTILSSSNSTMSSVVVTANGSDSKKFKGDDKMIGAP
SRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEMASEEAAITMVNYYTAV
TPHLRNQPIYIQYSNHKELKTDDALNQRAQAVLQAVTAVQTASTPLTGTTVSESAVTPAQ
SPVLRVIIDNMYYPVTLDVLYQIFSKFGPVLKIITFTKNNQFQALLQYSDPMNAHQAKLA
LDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQSSMDPAIAAAFAKE
SSLLGTPAGMMSSPYSGSSGFPTSLSFAQTAAVPGSLSPLAMPGRVTMSGVASANHSVLL
VSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALVQMTDVNQAQLAMSHLNGQKMY
GKIIRVTLSKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSN
IPPSITEDNLKILFTNTGGKVKGFKFFQRDHKMALLQMCSVEEAIQALIDLHNYDLGENH
HLRVSFSKSTI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttcctcttacagtattcttactgatgttacagttggcctaaagcggggatct
gacgaactttctggcaccattcttagcagctcaaactctaccatgagcagtgtggttgtt
actgctaatggcagtgacagcaaaaaatttaaaggtgacgataagatgattggtgcacca
tcccgtgttctccacattaggaagctgcctggtgaagttacggaaactgaggtcatagct
ttgggtttaccatttggcaaggttaccaacattttgatgctgaaagggaaaaatcaggct
ttcttggaaatggcttctgaagaggcagccattactatggtgaattactacactgcagta
acacctcaccttcggaatcagcctatctacatccagtactcaaaccataaagaattgaag
acagatgatgctttaaatcagcgtgcccaagctgttcttcaggcggtaactgctgtgcag
acagcaagcaccccgcttactggaactactgtcagtgagagtgcagtgacaccagctcag
agcccggtactcagagtaattattgacaacatgtactatccagtaactctggatgtactt
tatcagattttttccaagtttgggccagtattgaaaatcattactttcacaaagaataat
cagtttcaagctctgctgcaatattctgatcctatgaatgcacaccaagcaaaactggct
ctggatggtcagaatatttataatgcttgctgcaccctcaggattgatttttcaaaattg
gtgaacttgaatgtaaaatacaacaatgataaaagtcgtgactatacccgtccagatctt
ccttcaggagatggccagtcatctatggatcctgccattgctgcagcatttgctaaggag
agctcccttcttggtacccctgcaggaatgatgtccagtccatacagtggaagctctggg
tttccaacttcattaagctttgcacagactgcagctgttccaggatccctgagcccattg
gctatgcctggtcgtgtaacaatgtctggagtagcttctgccaaccacagtgtccttctg
gttagcaatctgaatgacgagatggttacgccccaaagtctgtttaccctcttcggtgtt
tatggtgatgtgcagcgtgtgaagattttatacaataaaaaagatagtgctcttgtacaa
atgactgatgtgaaccaagcacagctggccatgagccacttaaatgggcagaaaatgtat
ggaaagattatccgtgtcacactgtccaaacaccagacagtgcagctacctcgagagggt
ctggatgatcagggattgacaaaagattttactaactctccacttcatcgtttcaaaaaa
cctggatcaaagaatttccagaatatattccctccctctgctactcttcatctttcaaat
attccaccttcaattactgaagataatctcaagatactttttacaaacactggtggcaaa
gtgaagggctttaaattcttccaaagggatcacaaaatggcgctgctgcaaatgtgttct
gtggaggaagcaattcaggcactcattgaccttcacaactatgatcttggagagaatcat
catctgagagtctccttctccaaatcgactatctga
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